(98 nodes) Transport vesicle membrane network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZW38_BRAFL	Uncharacterized protein. (225 aa)
	C3ZZ71_BRAFL	MFS domain-containing protein. (508 aa)
	C4A0I6_BRAFL	MARVEL domain-containing protein. (259 aa)
	C4A0Y2_BRAFL	Uncharacterized protein. (166 aa)
	C3XU80_BRAFL	Uncharacterized protein. (363 aa)
	C3XXF7_BRAFL	BHLH domain-containing protein. (1047 aa)
	C3XZI4_BRAFL	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (782 aa)
	C3XZI6_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (239 aa)
	C3Y1H1_BRAFL	C2 domain-containing protein. (138 aa)
	C3Y1H2_BRAFL	Uncharacterized protein. (1144 aa)
	C3Y1K5_BRAFL	Aa_trans domain-containing protein. (517 aa)
	C3Y468_BRAFL	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (508 aa)
	C3Y520_BRAFL	Uncharacterized protein. (213 aa)
	C3Y6U6_BRAFL	MHD2 domain-containing protein. (1621 aa)
	C3Y7F4_BRAFL	Uncharacterized protein. (596 aa)
	C3Y7G4_BRAFL	Uncharacterized protein. (160 aa)
	C3Y7G6_BRAFL	Uncharacterized protein. (184 aa)
	C3YAU7_BRAFL	Uncharacterized protein. (491 aa)
	C3YDP3_BRAFL	MFS domain-containing protein. (241 aa)
	C3YDP4_BRAFL	Uncharacterized protein. (376 aa)
	C3YEV2_BRAFL	Uncharacterized protein. (288 aa)
	C3YEX7_BRAFL	Uncharacterized protein. (222 aa)
	C3YFZ3_BRAFL	Uncharacterized protein. (272 aa)
	C3YGW1_BRAFL	Uncharacterized protein. (513 aa)
	C3YJA1_BRAFL	Uncharacterized protein. (274 aa)
	C3YJH1_BRAFL	Uncharacterized protein. (354 aa)
	C3YKX3_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (206 aa)
	C3YL72_BRAFL	WD_REPEATS_REGION domain-containing protein. (1113 aa)
	C3YLC2_BRAFL	Uncharacterized protein. (419 aa)
	C3YNA9_BRAFL	MARVEL domain-containing protein. (206 aa)
	C3YNP3_BRAFL	Uncharacterized protein. (899 aa)
	C3YP19_BRAFL	Uso1_p115_head domain-containing protein. (618 aa)
	C3XTT3_BRAFL	AP-1 complex subunit gamma. (846 aa)
	C3XRU7_BRAFL	Uncharacterized protein. (2383 aa)
	C3XQ82_BRAFL	V-SNARE coiled-coil homology domain-containing protein. (125 aa)
	C3YP45_BRAFL	Uncharacterized protein. (1159 aa)
	C3YP46_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (183 aa)
	C3YP47_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (552 aa)
	C3YP48_BRAFL	Uncharacterized protein. (483 aa)
	C3YP49_BRAFL	Uncharacterized protein. (552 aa)
	C3YP64_BRAFL	Uncharacterized protein. (108 aa)
	C3YQ66_BRAFL	Uncharacterized protein. (520 aa)
	C3YRU5_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (220 aa)
	C3YSJ1_BRAFL	Uncharacterized protein. (1454 aa)
	C3YTN9_BRAFL	Uncharacterized protein. (128 aa)
	C3YU03_BRAFL	Protein transport protein sec16. (2645 aa)
	C3YU04_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (226 aa)
	C3YVL3_BRAFL	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (318 aa)
	C3YWE3_BRAFL	Synaptogyrin. (226 aa)
	C3YZ96_BRAFL	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (159 aa)
	C3YZV8_BRAFL	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (248 aa)
	C3Z089_BRAFL	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (211 aa)
	C3Z0W2_BRAFL	MFS domain-containing protein. (285 aa)
	C3Z1A4_BRAFL	Uncharacterized protein. (313 aa)
	C3Z1K6_BRAFL	MFS domain-containing protein. (402 aa)
	C3Z3W7_BRAFL	TSNAXIP1_N domain-containing protein. (582 aa)
	C3Z473_BRAFL	Uncharacterized protein. (207 aa)
	C3Z4L5_BRAFL	MFS domain-containing protein. (461 aa)
	C3Z4L7_BRAFL	C2 domain-containing protein. (129 aa)
	C3Z4L8_BRAFL	C2 domain-containing protein. (444 aa)
	C3Z5P8_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (196 aa)
	C3Z5Q7_BRAFL	Uncharacterized protein. (87 aa)
	C3Z5Y6_BRAFL	Uncharacterized protein. (452 aa)
	C3Z6H6_BRAFL	Uncharacterized protein. (334 aa)
	C3Z6K0_BRAFL	Uncharacterized protein. (269 aa)
	C3Z6Q6_BRAFL	Uncharacterized protein. (336 aa)
	C3Z977_BRAFL	C2 domain-containing protein. (143 aa)
	C3Z978_BRAFL	C2 domain-containing protein. (162 aa)
	C3Z9A8_BRAFL	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1533 aa)
	C3ZA91_BRAFL	Uncharacterized protein. (398 aa)
	C3ZAE2_BRAFL	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (707 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZAP3_BRAFL	ATP-grasp domain-containing protein. (393 aa)
	C3ZAU4_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (318 aa)
	C3ZB24_BRAFL	Uncharacterized protein. (177 aa)
	C3ZB25_BRAFL	Uncharacterized protein. (129 aa)
	C3ZBZ9_BRAFL	Uncharacterized protein. (262 aa)
	C3ZD41_BRAFL	Uncharacterized protein. (180 aa)
	C3ZD42_BRAFL	Uncharacterized protein. (971 aa)
	C3ZG74_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	C3ZGI7_BRAFL	Death domain-containing protein. (463 aa)
	C3ZGQ4_BRAFL	Cu2_monoox_C domain-containing protein. (435 aa)
	C3ZGU5_BRAFL	Uncharacterized protein. (317 aa)
	C3ZKL4_BRAFL	Uncharacterized protein. (301 aa)
	C3ZMU5_BRAFL	Clathrin_bdg domain-containing protein. (894 aa)
	C3ZQD7_BRAFL	Uncharacterized protein. (125 aa)
	C3ZQD8_BRAFL	Uncharacterized protein. (141 aa)
	C3ZSM9_BRAFL	Uncharacterized protein. (162 aa)
	C3ZSR3_BRAFL	Uncharacterized protein. (170 aa)
	C3ZSZ4_BRAFL	Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (96 aa)
	C3ZTN2_BRAFL	Uncharacterized protein. (175 aa)
	C3ZTN5_BRAFL	MFS domain-containing protein. (487 aa)
	C3ZU79_BRAFL	MFS domain-containing protein. (606 aa)
	C3XTX1_BRAFL	Uncharacterized protein. (182 aa)
	C3ZW32_BRAFL	Uncharacterized protein. (140 aa)
	C3ZW37_BRAFL	Uncharacterized protein. (373 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQ82_BRAFL	C3XRU7_BRAFL	C3XQ82	C3XRU7	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.549
C3XQ82_BRAFL	C3XTT3_BRAFL	C3XQ82	C3XTT3	V-SNARE coiled-coil homology domain-containing protein.	AP-1 complex subunit gamma.	0.680
C3XQ82_BRAFL	C3XU80_BRAFL	C3XQ82	C3XU80	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.798
C3XQ82_BRAFL	C3XZI6_BRAFL	C3XQ82	C3XZI6	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.942
C3XQ82_BRAFL	C3Y1H1_BRAFL	C3XQ82	C3Y1H1	V-SNARE coiled-coil homology domain-containing protein.	C2 domain-containing protein.	0.689
C3XQ82_BRAFL	C3Y1H2_BRAFL	C3XQ82	C3Y1H2	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.690
C3XQ82_BRAFL	C3Y1K5_BRAFL	C3XQ82	C3Y1K5	V-SNARE coiled-coil homology domain-containing protein.	Aa_trans domain-containing protein.	0.767
C3XQ82_BRAFL	C3Y520_BRAFL	C3XQ82	C3Y520	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.548
C3XQ82_BRAFL	C3Y6U6_BRAFL	C3XQ82	C3Y6U6	V-SNARE coiled-coil homology domain-containing protein.	MHD2 domain-containing protein.	0.508
C3XQ82_BRAFL	C3YEV2_BRAFL	C3XQ82	C3YEV2	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.797
C3XQ82_BRAFL	C3YFZ3_BRAFL	C3XQ82	C3YFZ3	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.421
C3XQ82_BRAFL	C3YKX3_BRAFL	C3XQ82	C3YKX3	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.798
C3XQ82_BRAFL	C3YNA9_BRAFL	C3XQ82	C3YNA9	V-SNARE coiled-coil homology domain-containing protein.	MARVEL domain-containing protein.	0.633
C3XQ82_BRAFL	C3YRU5_BRAFL	C3XQ82	C3YRU5	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.864
C3XQ82_BRAFL	C3YTN9_BRAFL	C3XQ82	C3YTN9	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.744
C3XQ82_BRAFL	C3YU04_BRAFL	C3XQ82	C3YU04	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.722
C3XQ82_BRAFL	C3YZV8_BRAFL	C3XQ82	C3YZV8	V-SNARE coiled-coil homology domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.752
C3XQ82_BRAFL	C3Z089_BRAFL	C3XQ82	C3Z089	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.772
C3XQ82_BRAFL	C3Z0W2_BRAFL	C3XQ82	C3Z0W2	V-SNARE coiled-coil homology domain-containing protein.	MFS domain-containing protein.	0.548
C3XQ82_BRAFL	C3Z1K6_BRAFL	C3XQ82	C3Z1K6	V-SNARE coiled-coil homology domain-containing protein.	MFS domain-containing protein.	0.548