(52 nodes) Synaptic vesicle membrane network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z6Q6_BRAFL	Uncharacterized protein. (336 aa)
	C3Z977_BRAFL	C2 domain-containing protein. (143 aa)
	C3ZA91_BRAFL	Uncharacterized protein. (398 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3ZAE2_BRAFL	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (707 aa)
	C4A0Y2_BRAFL	Uncharacterized protein. (166 aa)
	C4A0I6_BRAFL	MARVEL domain-containing protein. (259 aa)
	C3ZZ71_BRAFL	MFS domain-containing protein. (508 aa)
	C3ZW38_BRAFL	Uncharacterized protein. (225 aa)
	C3ZW37_BRAFL	Uncharacterized protein. (373 aa)
	C3ZW32_BRAFL	Uncharacterized protein. (140 aa)
	C3ZU79_BRAFL	MFS domain-containing protein. (606 aa)
	C3ZTN5_BRAFL	MFS domain-containing protein. (487 aa)
	C3ZTN2_BRAFL	Uncharacterized protein. (175 aa)
	C3ZGI7_BRAFL	Death domain-containing protein. (463 aa)
	C3ZG74_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	C3ZB25_BRAFL	Uncharacterized protein. (129 aa)
	C3ZAU4_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (318 aa)
	C3ZAP3_BRAFL	ATP-grasp domain-containing protein. (393 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3Y1H1_BRAFL	C2 domain-containing protein. (138 aa)
	C3XU80_BRAFL	Uncharacterized protein. (363 aa)
	C3XQ82_BRAFL	V-SNARE coiled-coil homology domain-containing protein. (125 aa)
	C3Y1H2_BRAFL	Uncharacterized protein. (1144 aa)
	C3Y1K5_BRAFL	Aa_trans domain-containing protein. (517 aa)
	C3Y468_BRAFL	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (508 aa)
	C3Y520_BRAFL	Uncharacterized protein. (213 aa)
	C3Y7F4_BRAFL	Uncharacterized protein. (596 aa)
	C3Y7G4_BRAFL	Uncharacterized protein. (160 aa)
	C3Y7G6_BRAFL	Uncharacterized protein. (184 aa)
	C3YAU7_BRAFL	Uncharacterized protein. (491 aa)
	C3YDP3_BRAFL	MFS domain-containing protein. (241 aa)
	C3YDP4_BRAFL	Uncharacterized protein. (376 aa)
	C3YEX7_BRAFL	Uncharacterized protein. (222 aa)
	C3YFZ3_BRAFL	Uncharacterized protein. (272 aa)
	C3YGW1_BRAFL	Uncharacterized protein. (513 aa)
	C3YJH1_BRAFL	Uncharacterized protein. (354 aa)
	C3YLC2_BRAFL	Uncharacterized protein. (419 aa)
	C3YNA9_BRAFL	MARVEL domain-containing protein. (206 aa)
	C3YNP3_BRAFL	Uncharacterized protein. (899 aa)
	C3YTN9_BRAFL	Uncharacterized protein. (128 aa)
	C3YWE3_BRAFL	Synaptogyrin. (226 aa)
	C3YZ96_BRAFL	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (159 aa)
	C3YZV8_BRAFL	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (248 aa)
	C3Z0W2_BRAFL	MFS domain-containing protein. (285 aa)
	C3Z1K6_BRAFL	MFS domain-containing protein. (402 aa)
	C3Z473_BRAFL	Uncharacterized protein. (207 aa)
	C3Z4L8_BRAFL	C2 domain-containing protein. (444 aa)
	C3Z5Q7_BRAFL	Uncharacterized protein. (87 aa)
	C3Z6H6_BRAFL	Uncharacterized protein. (334 aa)
	C3Z6K0_BRAFL	Uncharacterized protein. (269 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQ82_BRAFL	C3XU80_BRAFL	C3XQ82	C3XU80	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.798
C3XQ82_BRAFL	C3Y1H1_BRAFL	C3XQ82	C3Y1H1	V-SNARE coiled-coil homology domain-containing protein.	C2 domain-containing protein.	0.689
C3XQ82_BRAFL	C3Y1H2_BRAFL	C3XQ82	C3Y1H2	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.690
C3XQ82_BRAFL	C3Y1K5_BRAFL	C3XQ82	C3Y1K5	V-SNARE coiled-coil homology domain-containing protein.	Aa_trans domain-containing protein.	0.767
C3XQ82_BRAFL	C3Y520_BRAFL	C3XQ82	C3Y520	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.548
C3XQ82_BRAFL	C3YFZ3_BRAFL	C3XQ82	C3YFZ3	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.421
C3XQ82_BRAFL	C3YNA9_BRAFL	C3XQ82	C3YNA9	V-SNARE coiled-coil homology domain-containing protein.	MARVEL domain-containing protein.	0.633
C3XQ82_BRAFL	C3YTN9_BRAFL	C3XQ82	C3YTN9	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.744
C3XQ82_BRAFL	C3YZV8_BRAFL	C3XQ82	C3YZV8	V-SNARE coiled-coil homology domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.752
C3XQ82_BRAFL	C3Z0W2_BRAFL	C3XQ82	C3Z0W2	V-SNARE coiled-coil homology domain-containing protein.	MFS domain-containing protein.	0.548
C3XQ82_BRAFL	C3Z1K6_BRAFL	C3XQ82	C3Z1K6	V-SNARE coiled-coil homology domain-containing protein.	MFS domain-containing protein.	0.548
C3XQ82_BRAFL	C3Z4L8_BRAFL	C3XQ82	C3Z4L8	V-SNARE coiled-coil homology domain-containing protein.	C2 domain-containing protein.	0.781
C3XQ82_BRAFL	C3Z6H6_BRAFL	C3XQ82	C3Z6H6	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.798
C3XQ82_BRAFL	C3Z6K0_BRAFL	C3XQ82	C3Z6K0	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.649
C3XQ82_BRAFL	C3Z977_BRAFL	C3XQ82	C3Z977	V-SNARE coiled-coil homology domain-containing protein.	C2 domain-containing protein.	0.433
C3XQ82_BRAFL	C3ZA91_BRAFL	C3XQ82	C3ZA91	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.633
C3XQ82_BRAFL	C3ZAE2_BRAFL	C3XQ82	C3ZAE2	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.673
C3XQ82_BRAFL	C3ZAP3_BRAFL	C3XQ82	C3ZAP3	V-SNARE coiled-coil homology domain-containing protein.	ATP-grasp domain-containing protein.	0.811
C3XQ82_BRAFL	C3ZAU4_BRAFL	C3XQ82	C3ZAU4	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.944
C3XQ82_BRAFL	C3ZG74_BRAFL	C3XQ82	C3ZG74	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.965