(36 nodes) Positive regulation of protein-containing complex assembly network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y6F9_BRAFL	TIR domain-containing protein. (139 aa)
	C3Y9J5_BRAFL	Uncharacterized protein. (674 aa)
	C3YBI8_BRAFL	Calponin-homology (CH) domain-containing protein. (581 aa)
	C3YCZ9_BRAFL	CARMIL_C domain-containing protein. (1859 aa)
	C3YDF6_BRAFL	ANK_REP_REGION domain-containing protein. (91 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YJ64_BRAFL	CAP-Gly domain-containing protein. (113 aa)
	C3YJ65_BRAFL	Dynactin domain-containing protein. (1139 aa)
	C3YZA9_BRAFL	Uncharacterized protein. (1048 aa)
	C3YZB4_BRAFL	Uncharacterized protein. (1463 aa)
	C3Z131_BRAFL	Uncharacterized protein. (174 aa)
	C3Z2D6_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	C3Z3L5_BRAFL	AAA domain-containing protein; Belongs to the AAA ATPase family. (392 aa)
	C3Z4Z7_BRAFL	Cnn_1N domain-containing protein. (2545 aa)
	C3Z4Z9_BRAFL	Uncharacterized protein. (226 aa)
	C3Z5X5_BRAFL	UDENN FNIP1/2-type domain-containing protein. (1126 aa)
	C3Z9X0_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2531 aa)
	C3ZAW1_BRAFL	Uncharacterized protein. (215 aa)
	C3XWH9_BRAFL	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (226 aa)
	C3Y0K0_BRAFL	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (417 aa)
	C3Y2Q3_BRAFL	Helicase ATP-binding domain-containing protein. (318 aa)
	C3Y3R6_BRAFL	ANK_REP_REGION domain-containing protein. (826 aa)
	C3ZQ72_BRAFL	Uncharacterized protein. (173 aa)
	C3ZNI8_BRAFL	Uncharacterized protein. (297 aa)
	C3ZMZ2_BRAFL	Uncharacterized protein. (656 aa)
	C3ZMZ0_BRAFL	Uncharacterized protein. (652 aa)
	C3ZLL7_BRAFL	DUF3385 domain-containing protein. (1400 aa)
	C3ZLL3_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1049 aa)
	C3ZLE6_BRAFL	Uncharacterized protein. (1136 aa)
	C3ZKQ8_BRAFL	PH domain-containing protein. (673 aa)
	C3ZJ41_BRAFL	Uncharacterized protein. (1669 aa)
	C3Y429_BRAFL	Uncharacterized protein. (1173 aa)
	C3Y528_BRAFL	Uncharacterized protein. (1907 aa)
	C3Y6B2_BRAFL	Uncharacterized protein. (1975 aa)
	C3XU62_BRAFL	Uncharacterized protein. (1010 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y528_BRAFL	C3Z4Z7_BRAFL	C3Y528	C3Z4Z7	Uncharacterized protein.	Cnn_1N domain-containing protein.	0.526
C3Y9J5_BRAFL	C3YZB4_BRAFL	C3Y9J5	C3YZB4	Uncharacterized protein.	Uncharacterized protein.	0.734
C3Y9J5_BRAFL	C3ZLE6_BRAFL	C3Y9J5	C3ZLE6	Uncharacterized protein.	Uncharacterized protein.	0.761
C3YDF6_BRAFL	C3YH71_BRAFL	C3YDF6	C3YH71	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.808
C3YDF6_BRAFL	C3YH73_BRAFL	C3YDF6	C3YH73	ANK_REP_REGION domain-containing protein.	FAT domain-containing protein.	0.808
C3YDF6_BRAFL	C3Z9X0_BRAFL	C3YDF6	C3Z9X0	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.964
C3YH71_BRAFL	C3YDF6_BRAFL	C3YH71	C3YDF6	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	ANK_REP_REGION domain-containing protein.	0.808
C3YH71_BRAFL	C3YH73_BRAFL	C3YH71	C3YH73	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.948
C3YH71_BRAFL	C3Z9X0_BRAFL	C3YH71	C3Z9X0	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.967
C3YH71_BRAFL	C3ZLL3_BRAFL	C3YH71	C3ZLL3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.411
C3YH71_BRAFL	C3ZLL7_BRAFL	C3YH71	C3ZLL7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DUF3385 domain-containing protein.	0.908
C3YH73_BRAFL	C3YDF6_BRAFL	C3YH73	C3YDF6	FAT domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.808
C3YH73_BRAFL	C3YH71_BRAFL	C3YH73	C3YH71	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.948
C3YH73_BRAFL	C3Z9X0_BRAFL	C3YH73	C3Z9X0	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.967
C3YH73_BRAFL	C3ZLL3_BRAFL	C3YH73	C3ZLL3	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.411
C3YH73_BRAFL	C3ZLL7_BRAFL	C3YH73	C3ZLL7	FAT domain-containing protein.	DUF3385 domain-containing protein.	0.411
C3YZB4_BRAFL	C3Y9J5_BRAFL	C3YZB4	C3Y9J5	Uncharacterized protein.	Uncharacterized protein.	0.734
C3YZB4_BRAFL	C3ZLE6_BRAFL	C3YZB4	C3ZLE6	Uncharacterized protein.	Uncharacterized protein.	0.818
C3Z3L5_BRAFL	C3ZLL3_BRAFL	C3Z3L5	C3ZLL3	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.862
C3Z3L5_BRAFL	C3ZLL7_BRAFL	C3Z3L5	C3ZLL7	AAA domain-containing protein; Belongs to the AAA ATPase family.	DUF3385 domain-containing protein.	0.862