(28 nodes) Heterochromatin assembly network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XUK5_BRAFL	GFA domain-containing protein. (119 aa)
	C3XVG1_BRAFL	Uncharacterized protein. (1015 aa)
	C3XWP9_BRAFL	Uncharacterized protein. (142 aa)
	C3Y0R0_BRAFL	BAH domain-containing protein. (846 aa)
	C3Y1X1_BRAFL	MBD domain-containing protein. (298 aa)
	C3Y212_BRAFL	Deacetylase sirtuin-type domain-containing protein. (414 aa)
	C3Y505_BRAFL	Uncharacterized protein. (572 aa)
	C3Y6B5_BRAFL	Uncharacterized protein. (1548 aa)
	C3YCV4_BRAFL	CXC domain-containing protein. (625 aa)
	C3YCV5_BRAFL	SET domain-containing protein. (85 aa)
	C3YJ78_BRAFL	Uncharacterized protein. (122 aa)
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3YL13_BRAFL	Histone acetyltransferase type B catalytic subunit. (404 aa)
	C3YLR8_BRAFL	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (701 aa)
	C3YZC3_BRAFL	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (307 aa)
	C3YZQ2_BRAFL	Cytosine-specific methyltransferase. (1275 aa)
	C3Z272_BRAFL	Uncharacterized protein. (725 aa)
	C3Z273_BRAFL	SMC hinge domain-containing protein. (1148 aa)
	C3Z446_BRAFL	PPM-type phosphatase domain-containing protein. (317 aa)
	C3Z8A2_BRAFL	RB_A domain-containing protein. (305 aa)
	C3ZBY7_BRAFL	Uncharacterized protein. (1553 aa)
	C3ZBY9_BRAFL	C2H2-type domain-containing protein. (1592 aa)
	C3ZBZ0_BRAFL	Uncharacterized protein. (1321 aa)
	C3ZBZ2_BRAFL	Uncharacterized protein. (1771 aa)
	C3ZHK1_BRAFL	BRCT domain-containing protein. (514 aa)
	C3ZS16_BRAFL	SMC hinge domain-containing protein. (1932 aa)
	C3ZWY4_BRAFL	CBFD_NFYB_HMF domain-containing protein. (153 aa)
	C3ZXL7_BRAFL	Uncharacterized protein; Belongs to the intermediate filament family. (593 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XVG1_BRAFL	C3ZBY7_BRAFL	C3XVG1	C3ZBY7	Uncharacterized protein.	Uncharacterized protein.	0.579
C3XVG1_BRAFL	C3ZBY9_BRAFL	C3XVG1	C3ZBY9	Uncharacterized protein.	C2H2-type domain-containing protein.	0.578
C3XVG1_BRAFL	C3ZBZ0_BRAFL	C3XVG1	C3ZBZ0	Uncharacterized protein.	Uncharacterized protein.	0.580
C3XVG1_BRAFL	C3ZBZ2_BRAFL	C3XVG1	C3ZBZ2	Uncharacterized protein.	Uncharacterized protein.	0.577
C3Y0R0_BRAFL	C3YZC3_BRAFL	C3Y0R0	C3YZC3	BAH domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.540
C3Y1X1_BRAFL	C3YZQ2_BRAFL	C3Y1X1	C3YZQ2	MBD domain-containing protein.	Cytosine-specific methyltransferase.	0.600
C3Y212_BRAFL	C3YKX2_BRAFL	C3Y212	C3YKX2	Deacetylase sirtuin-type domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.686
C3Y212_BRAFL	C3YZC3_BRAFL	C3Y212	C3YZC3	Deacetylase sirtuin-type domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.448
C3YCV4_BRAFL	C3YCV5_BRAFL	C3YCV4	C3YCV5	CXC domain-containing protein.	SET domain-containing protein.	0.540
C3YCV4_BRAFL	C3YKX2_BRAFL	C3YCV4	C3YKX2	CXC domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.606
C3YCV4_BRAFL	C3YZQ2_BRAFL	C3YCV4	C3YZQ2	CXC domain-containing protein.	Cytosine-specific methyltransferase.	0.887
C3YCV5_BRAFL	C3YCV4_BRAFL	C3YCV5	C3YCV4	SET domain-containing protein.	CXC domain-containing protein.	0.540
C3YCV5_BRAFL	C3YKX2_BRAFL	C3YCV5	C3YKX2	SET domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.445
C3YCV5_BRAFL	C3YZQ2_BRAFL	C3YCV5	C3YZQ2	SET domain-containing protein.	Cytosine-specific methyltransferase.	0.809
C3YKX2_BRAFL	C3Y212_BRAFL	C3YKX2	C3Y212	Deacetylase sirtuin-type domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.686
C3YKX2_BRAFL	C3YCV4_BRAFL	C3YKX2	C3YCV4	Deacetylase sirtuin-type domain-containing protein.	CXC domain-containing protein.	0.606
C3YKX2_BRAFL	C3YCV5_BRAFL	C3YKX2	C3YCV5	Deacetylase sirtuin-type domain-containing protein.	SET domain-containing protein.	0.445
C3YKX2_BRAFL	C3YLR8_BRAFL	C3YKX2	C3YLR8	Deacetylase sirtuin-type domain-containing protein.	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	0.729
C3YKX2_BRAFL	C3YZC3_BRAFL	C3YKX2	C3YZC3	Deacetylase sirtuin-type domain-containing protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.859
C3YKX2_BRAFL	C3YZQ2_BRAFL	C3YKX2	C3YZQ2	Deacetylase sirtuin-type domain-containing protein.	Cytosine-specific methyltransferase.	0.537