(29 nodes) Response to estradiol network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZGU5_BRAFL	Uncharacterized protein. (317 aa)
	C3XRB1_BRAFL	Uncharacterized protein. (367 aa)
	C3XZY0_BRAFL	Histone H2A; Belongs to the histone H2A family. (128 aa)
	C3Y2J9_BRAFL	ENDO3c domain-containing protein. (401 aa)
	C3Y396_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (242 aa)
	C3Y5L4_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (585 aa)
	C3Y6A4_BRAFL	RuvB-like helicase; Belongs to the RuvB family. (468 aa)
	C3Y966_BRAFL	Uncharacterized protein. (272 aa)
	C3YDI6_BRAFL	Uncharacterized protein. (281 aa)
	C3YPS7_BRAFL	Uncharacterized protein. (480 aa)
	C3YQ66_BRAFL	Uncharacterized protein. (520 aa)
	C3YVH5_BRAFL	Uncharacterized protein. (1824 aa)
	C3YZ38_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (809 aa)
	C3YZW2_BRAFL	Uncharacterized protein. (485 aa)
	C3Z052_BRAFL	Uncharacterized protein. (1806 aa)
	C3Z332_BRAFL	Uncharacterized protein. (829 aa)
	C3ZGQ4_BRAFL	Cu2_monoox_C domain-containing protein. (435 aa)
	C3ZJ15_BRAFL	Uncharacterized protein. (3569 aa)
	C3ZJ91_BRAFL	Vitellogenin domain-containing protein. (1042 aa)
	C3ZJ93_BRAFL	Uncharacterized protein. (956 aa)
	C3ZT37_BRAFL	Uncharacterized protein. (858 aa)
	C3ZV92_BRAFL	DUF1279 domain-containing protein. (121 aa)
	C3ZXV0_BRAFL	LRRNT domain-containing protein. (531 aa)
	C3ZY21_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (246 aa)
	C3ZY28_BRAFL	CARD domain-containing protein. (105 aa)
	C3ZZC6_BRAFL	Uncharacterized protein. (88 aa)
	C3ZZI9_BRAFL	Uncharacterized protein. (335 aa)
	C3ZZJ3_BRAFL	Uncharacterized protein. (314 aa)
	C3ZZZ0_BRAFL	Uncharacterized protein. (525 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRB1_BRAFL	C3XZY0_BRAFL	C3XRB1	C3XZY0	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.563
C3XRB1_BRAFL	C3ZT37_BRAFL	C3XRB1	C3ZT37	Uncharacterized protein.	Uncharacterized protein.	0.461
C3XZY0_BRAFL	C3XRB1_BRAFL	C3XZY0	C3XRB1	Histone H2A; Belongs to the histone H2A family.	Uncharacterized protein.	0.563
C3XZY0_BRAFL	C3Y6A4_BRAFL	C3XZY0	C3Y6A4	Histone H2A; Belongs to the histone H2A family.	RuvB-like helicase; Belongs to the RuvB family.	0.937
C3Y396_BRAFL	C3ZT37_BRAFL	C3Y396	C3ZT37	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.411
C3Y6A4_BRAFL	C3XZY0_BRAFL	C3Y6A4	C3XZY0	RuvB-like helicase; Belongs to the RuvB family.	Histone H2A; Belongs to the histone H2A family.	0.937
C3Y6A4_BRAFL	C3ZT37_BRAFL	C3Y6A4	C3ZT37	RuvB-like helicase; Belongs to the RuvB family.	Uncharacterized protein.	0.840
C3YQ66_BRAFL	C3ZGU5_BRAFL	C3YQ66	C3ZGU5	Uncharacterized protein.	Uncharacterized protein.	0.899
C3YZ38_BRAFL	C3ZT37_BRAFL	C3YZ38	C3ZT37	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.411
C3ZGU5_BRAFL	C3YQ66_BRAFL	C3ZGU5	C3YQ66	Uncharacterized protein.	Uncharacterized protein.	0.899
C3ZT37_BRAFL	C3XRB1_BRAFL	C3ZT37	C3XRB1	Uncharacterized protein.	Uncharacterized protein.	0.461
C3ZT37_BRAFL	C3Y396_BRAFL	C3ZT37	C3Y396	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.411
C3ZT37_BRAFL	C3Y6A4_BRAFL	C3ZT37	C3Y6A4	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.840
C3ZT37_BRAFL	C3YZ38_BRAFL	C3ZT37	C3YZ38	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.411
C3ZT37_BRAFL	C3ZY21_BRAFL	C3ZT37	C3ZY21	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.411
C3ZT37_BRAFL	C3ZY28_BRAFL	C3ZT37	C3ZY28	Uncharacterized protein.	CARD domain-containing protein.	0.411
C3ZY21_BRAFL	C3ZT37_BRAFL	C3ZY21	C3ZT37	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.411
C3ZY28_BRAFL	C3ZT37_BRAFL	C3ZY28	C3ZT37	CARD domain-containing protein.	Uncharacterized protein.	0.411