(61 nodes) Positive regulation of intracellular transport network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XZ73_BRAFL	Uncharacterized protein. (1052 aa)
	C4A017_BRAFL	Uncharacterized protein. (205 aa)
	C3ZZZ0_BRAFL	Uncharacterized protein. (525 aa)
	C3ZZJ3_BRAFL	Uncharacterized protein. (314 aa)
	C3ZZI9_BRAFL	Uncharacterized protein. (335 aa)
	C3ZZD3_BRAFL	Uncharacterized protein. (189 aa)
	C3ZXV0_BRAFL	LRRNT domain-containing protein. (531 aa)
	C3ZX52_BRAFL	Uncharacterized protein. (104 aa)
	C3ZVX5_BRAFL	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (540 aa)
	C3ZTW1_BRAFL	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1250 aa)
	C3ZT96_BRAFL	Uncharacterized protein. (1672 aa)
	C3ZS25_BRAFL	Uncharacterized protein. (2721 aa)
	C3ZRU7_BRAFL	Uncharacterized protein. (120 aa)
	C3ZR37_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	C3ZN17_BRAFL	FCP1 homology domain-containing protein. (232 aa)
	C3ZKZ2_BRAFL	Uncharacterized protein. (388 aa)
	C3ZCV6_BRAFL	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (290 aa)
	C3ZCV5_BRAFL	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (621 aa)
	C3Z6E4_BRAFL	Uncharacterized protein. (1203 aa)
	C3Z6A1_BRAFL	RIO domain-containing protein. (532 aa)
	C3Z3J5_BRAFL	Uncharacterized protein. (192 aa)
	C3Z332_BRAFL	Uncharacterized protein. (829 aa)
	C3Z1V4_BRAFL	C2 domain-containing protein. (620 aa)
	C3Z1V2_BRAFL	Uncharacterized protein. (87 aa)
	C3YXX8_BRAFL	BCAS3 domain-containing protein. (825 aa)
	C3YVK2_BRAFL	Uncharacterized protein. (168 aa)
	C3YV77_BRAFL	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (570 aa)
	C3YRU1_BRAFL	Uncharacterized protein. (901 aa)
	C3YQL7_BRAFL	SCP2 domain-containing protein. (128 aa)
	C3YPS7_BRAFL	Uncharacterized protein. (480 aa)
	C3YP64_BRAFL	Uncharacterized protein. (108 aa)
	C3YP47_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (552 aa)
	C3YP46_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (183 aa)
	C3YMM0_BRAFL	Uncharacterized protein. (381 aa)
	C3YM38_BRAFL	EF-hand domain-containing protein. (352 aa)
	C3YLY7_BRAFL	Uncharacterized protein. (466 aa)
	C3YLM1_BRAFL	Mab-21 domain-containing protein. (457 aa)
	C3YLM0_BRAFL	Mab-21 domain-containing protein. (326 aa)
	C3YLL9_BRAFL	Mab-21 domain-containing protein. (275 aa)
	C3YKX9_BRAFL	Uncharacterized protein. (564 aa)
	C3YKV1_BRAFL	RING-type domain-containing protein. (894 aa)
	C3YJI7_BRAFL	Uncharacterized protein. (923 aa)
	C3YF93_BRAFL	Mab-21 domain-containing protein. (558 aa)
	C3YEW7_BRAFL	Uncharacterized protein. (460 aa)
	C3YD04_BRAFL	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (800 aa)
	C3YB22_BRAFL	calpain_III domain-containing protein. (265 aa)
	C3YB16_BRAFL	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (176 aa)
	C3Y7G6_BRAFL	Uncharacterized protein. (184 aa)
	C3Y7G4_BRAFL	Uncharacterized protein. (160 aa)
	C3Y4P7_BRAFL	Zpr1 domain-containing protein. (262 aa)
	C3Y332_BRAFL	Uncharacterized protein. (1237 aa)
	C3Y212_BRAFL	Deacetylase sirtuin-type domain-containing protein. (414 aa)
	C3Y0G1_BRAFL	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily. (420 aa)
	C3XZZ5_BRAFL	Uncharacterized protein. (435 aa)
	C3XY93_BRAFL	Peptidase M60 domain-containing protein. (533 aa)
	C3XXX7_BRAFL	PID domain-containing protein. (128 aa)
	C3XWD2_BRAFL	PCM1_C domain-containing protein. (1969 aa)
	C3XU08_BRAFL	Rab-GAP TBC domain-containing protein. (404 aa)
	C3XTM6_BRAFL	FERM domain-containing protein. (561 aa)
	C3XRU7_BRAFL	Uncharacterized protein. (2383 aa)
	C3XPE8_BRAFL	Peptidase M60 domain-containing protein. (676 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XWD2_BRAFL	C3ZKZ2_BRAFL	C3XWD2	C3ZKZ2	PCM1_C domain-containing protein.	Uncharacterized protein.	0.750
C3XZZ5_BRAFL	C3Y332_BRAFL	C3XZZ5	C3Y332	Uncharacterized protein.	Uncharacterized protein.	0.435
C3Y0G1_BRAFL	C3ZR37_BRAFL	C3Y0G1	C3ZR37	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.636
C3Y332_BRAFL	C3XZZ5_BRAFL	C3Y332	C3XZZ5	Uncharacterized protein.	Uncharacterized protein.	0.435
C3Y7G4_BRAFL	C3Y7G6_BRAFL	C3Y7G4	C3Y7G6	Uncharacterized protein.	Uncharacterized protein.	0.543
C3Y7G6_BRAFL	C3Y7G4_BRAFL	C3Y7G6	C3Y7G4	Uncharacterized protein.	Uncharacterized protein.	0.543
C3YMM0_BRAFL	C3ZT96_BRAFL	C3YMM0	C3ZT96	Uncharacterized protein.	Uncharacterized protein.	0.508
C3YP46_BRAFL	C3YP47_BRAFL	C3YP46	C3YP47	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.551
C3YP46_BRAFL	C3YP64_BRAFL	C3YP46	C3YP64	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.548
C3YP47_BRAFL	C3YP46_BRAFL	C3YP47	C3YP46	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.551
C3YP47_BRAFL	C3YP64_BRAFL	C3YP47	C3YP64	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.571
C3YP64_BRAFL	C3YP46_BRAFL	C3YP64	C3YP46	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.548
C3YP64_BRAFL	C3YP47_BRAFL	C3YP64	C3YP47	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.571
C3YQL7_BRAFL	C3ZVX5_BRAFL	C3YQL7	C3ZVX5	SCP2 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.770
C3YVK2_BRAFL	C3Z6E4_BRAFL	C3YVK2	C3Z6E4	Uncharacterized protein.	Uncharacterized protein.	0.402
C3Z1V2_BRAFL	C3Z1V4_BRAFL	C3Z1V2	C3Z1V4	Uncharacterized protein.	C2 domain-containing protein.	0.444
C3Z1V2_BRAFL	C3ZR37_BRAFL	C3Z1V2	C3ZR37	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.458
C3Z1V4_BRAFL	C3Z1V2_BRAFL	C3Z1V4	C3Z1V2	C2 domain-containing protein.	Uncharacterized protein.	0.444
C3Z1V4_BRAFL	C3ZR37_BRAFL	C3Z1V4	C3ZR37	C2 domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.458
C3Z6E4_BRAFL	C3YVK2_BRAFL	C3Z6E4	C3YVK2	Uncharacterized protein.	Uncharacterized protein.	0.402