(15 nodes) Protein-lipid complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZGZ2_BRAFL	Uncharacterized protein. (144 aa)
	C3ZWC6_BRAFL	Zn_dep_PLPC domain-containing protein. (823 aa)
	C3ZJ94_BRAFL	Uncharacterized protein. (200 aa)
	C3ZJ93_BRAFL	Uncharacterized protein. (956 aa)
	C3ZJ15_BRAFL	Uncharacterized protein. (3569 aa)
	C3ZIN0_BRAFL	Lipase domain-containing protein. (78 aa)
	C3Y985_BRAFL	Uncharacterized protein. (282 aa)
	C3Y338_BRAFL	Uncharacterized protein. (1291 aa)
	C3Y196_BRAFL	Uncharacterized protein. (373 aa)
	C3XU16_BRAFL	Vitellogenin domain-containing protein. (1571 aa)
	C3YBS3_BRAFL	Uncharacterized protein. (875 aa)
	C3YLE3_BRAFL	Lipase domain-containing protein. (72 aa)
	C3YLE6_BRAFL	Uncharacterized protein. (502 aa)
	C3YLE8_BRAFL	Lipase domain-containing protein. (83 aa)
	C3YLS4_BRAFL	Uncharacterized protein. (778 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y338_BRAFL	C3ZJ94_BRAFL	C3Y338	C3ZJ94	Uncharacterized protein.	Uncharacterized protein.	0.542
C3Y985_BRAFL	C3ZJ94_BRAFL	C3Y985	C3ZJ94	Uncharacterized protein.	Uncharacterized protein.	0.542
C3YBS3_BRAFL	C3ZJ94_BRAFL	C3YBS3	C3ZJ94	Uncharacterized protein.	Uncharacterized protein.	0.542
C3YLE6_BRAFL	C3YLE8_BRAFL	C3YLE6	C3YLE8	Uncharacterized protein.	Lipase domain-containing protein.	0.650
C3YLE8_BRAFL	C3YLE6_BRAFL	C3YLE8	C3YLE6	Lipase domain-containing protein.	Uncharacterized protein.	0.650
C3YLS4_BRAFL	C3ZJ94_BRAFL	C3YLS4	C3ZJ94	Uncharacterized protein.	Uncharacterized protein.	0.542
C3ZJ94_BRAFL	C3Y338_BRAFL	C3ZJ94	C3Y338	Uncharacterized protein.	Uncharacterized protein.	0.542
C3ZJ94_BRAFL	C3Y985_BRAFL	C3ZJ94	C3Y985	Uncharacterized protein.	Uncharacterized protein.	0.542
C3ZJ94_BRAFL	C3YBS3_BRAFL	C3ZJ94	C3YBS3	Uncharacterized protein.	Uncharacterized protein.	0.542
C3ZJ94_BRAFL	C3YLS4_BRAFL	C3ZJ94	C3YLS4	Uncharacterized protein.	Uncharacterized protein.	0.542