(125 nodes) Regulation of chromosome organization network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XV62_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (403 aa)
	C3XVD1_BRAFL	Uncharacterized protein. (3715 aa)
	C3XWI6_BRAFL	CP-type G domain-containing protein. (580 aa)
	C3XXY9_BRAFL	Uncharacterized protein. (145 aa)
	C3XYZ5_BRAFL	Protein kinase domain-containing protein. (211 aa)
	C3XYZ6_BRAFL	BUB1 N-terminal domain-containing protein. (234 aa)
	C3XZX7_BRAFL	WAPL domain-containing protein. (1304 aa)
	C3Y025_BRAFL	Cnd3 domain-containing protein. (1021 aa)
	C3Y0I8_BRAFL	Protein kinase domain-containing protein. (460 aa)
	C3Y0L2_BRAFL	APC1_C domain-containing protein. (2078 aa)
	C3Y0R7_BRAFL	ANAPC5 domain-containing protein. (747 aa)
	C3Y0Y4_BRAFL	NFRKB_winged domain-containing protein. (1283 aa)
	C3Y1F0_BRAFL	Uncharacterized protein. (1006 aa)
	C3Y1S5_BRAFL	SMC_N domain-containing protein. (1096 aa)
	C3Y1W8_BRAFL	Uncharacterized protein. (720 aa)
	C3Y212_BRAFL	Deacetylase sirtuin-type domain-containing protein. (414 aa)
	C3Y235_BRAFL	BHLH domain-containing protein. (369 aa)
	C3Y3A4_BRAFL	Uncharacterized protein. (110 aa)
	C3Y3Y6_BRAFL	Uncharacterized protein. (675 aa)
	C3Y429_BRAFL	Uncharacterized protein. (1173 aa)
	C3Y5H5_BRAFL	Uncharacterized protein. (1490 aa)
	C3Y5I7_BRAFL	Uncharacterized protein. (720 aa)
	C3Y5S4_BRAFL	Uncharacterized protein. (334 aa)
	C3Y6A4_BRAFL	RuvB-like helicase; Belongs to the RuvB family. (468 aa)
	C3Y7R6_BRAFL	PUA domain-containing protein. (470 aa)
	C3Y913_BRAFL	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family. (410 aa)
	C3Y937_BRAFL	Uncharacterized protein. (427 aa)
	C3Y9D0_BRAFL	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (3820 aa)
	C3Y9J6_BRAFL	HMG box domain-containing protein. (334 aa)
	C3Y9K6_BRAFL	Uncharacterized protein. (846 aa)
	C3YAI9_BRAFL	DNA helicase; Belongs to the MCM family. (892 aa)
	C3YBG7_BRAFL	RING-type domain-containing protein. (89 aa)
	C3YCM0_BRAFL	F-box domain-containing protein. (317 aa)
	C3YCQ9_BRAFL	Uncharacterized protein. (545 aa)
	C3YD16_BRAFL	Telo_bind domain-containing protein. (396 aa)
	C3YDF6_BRAFL	ANK_REP_REGION domain-containing protein. (91 aa)
	C3YEG7_BRAFL	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (181 aa)
	C3YG90_BRAFL	FHA_2 domain-containing protein. (633 aa)
	C3YGW9_BRAFL	Uncharacterized protein. (377 aa)
	C3YH55_BRAFL	Uncharacterized protein. (579 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	Q8T755_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (299 aa)
	C4A088_BRAFL	BTB domain-containing protein. (2428 aa)
	C3ZYC5_BRAFL	YL1_C domain-containing protein. (181 aa)
	C3ZXT7_BRAFL	Uncharacterized protein. (572 aa)
	C3ZXI5_BRAFL	Homeobox domain-containing protein. (430 aa)
	C3ZWE2_BRAFL	Uncharacterized protein. (1053 aa)
	C3ZV87_BRAFL	ANK_REP_REGION domain-containing protein. (91 aa)
	C3ZTM6_BRAFL	SWIM-type domain-containing protein. (1257 aa)
	C3ZT37_BRAFL	Uncharacterized protein. (858 aa)
	C3ZSM7_BRAFL	Ku domain-containing protein. (716 aa)
	C3ZS53_BRAFL	Uncharacterized protein. (1119 aa)
	C3ZQM1_BRAFL	Homeobox domain-containing protein. (171 aa)
	C3ZQJ9_BRAFL	Uncharacterized protein. (707 aa)
	C3ZQ21_BRAFL	HTH myb-type domain-containing protein. (55 aa)
	C3ZPH4_BRAFL	T-complex protein 1 subunit gamma. (540 aa)
	C3ZPE4_BRAFL	Protein kinase domain-containing protein. (427 aa)
	C3ZNX8_BRAFL	Uncharacterized protein. (233 aa)
	C3ZNW9_BRAFL	ERCC4 domain-containing protein. (515 aa)
	C3ZN29_BRAFL	CW-type domain-containing protein. (569 aa)
	C3ZMU1_BRAFL	Uncharacterized protein. (1878 aa)
	C3ZM73_BRAFL	ULP_PROTEASE domain-containing protein. (1702 aa)
	C3ZLP9_BRAFL	TPR_REGION domain-containing protein. (575 aa)
	C3ZLP6_BRAFL	HRDC domain-containing protein. (832 aa)
	C3ZLP4_BRAFL	Uncharacterized protein; Belongs to the actin family. (424 aa)
	C3ZKZ0_BRAFL	Uncharacterized protein. (255 aa)
	C3ZKU4_BRAFL	Uncharacterized protein. (103 aa)
	C3ZIA7_BRAFL	Helicase C-terminal domain-containing protein. (118 aa)
	C3ZI67_BRAFL	TPR_REGION domain-containing protein. (987 aa)
	C3ZHW1_BRAFL	Uncharacterized protein. (1570 aa)
	C3ZHV4_BRAFL	PAPA-1 domain-containing protein. (308 aa)
	C3ZHN8_BRAFL	G-patch domain-containing protein. (364 aa)
	C3ZH07_BRAFL	Uncharacterized protein. (545 aa)
	C3ZG27_BRAFL	Ubiquitin carboxyl-terminal hydrolase. (300 aa)
	C3ZF00_BRAFL	Uncharacterized protein. (790 aa)
	C3ZET4_BRAFL	PCI domain-containing protein. (383 aa)
	C3ZDY2_BRAFL	CULLIN_2 domain-containing protein; Belongs to the cullin family. (753 aa)
	C3ZCU0_BRAFL	Mitogen-activated protein kinase. (515 aa)
	C3ZCC7_BRAFL	Uncharacterized protein. (535 aa)
	C3ZA80_BRAFL	Uncharacterized protein. (1140 aa)
	C3Z9X0_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2531 aa)
	C3Z8A2_BRAFL	RB_A domain-containing protein. (305 aa)
	C3Z6B1_BRAFL	Nudix hydrolase domain-containing protein. (596 aa)
	C3Z6A1_BRAFL	RIO domain-containing protein. (532 aa)
	C3Z648_BRAFL	CW-type domain-containing protein. (769 aa)
	C3Z5Z2_BRAFL	HORMA domain-containing protein. (204 aa)
	C3Z4Z9_BRAFL	Uncharacterized protein. (226 aa)
	C3Z4M1_BRAFL	Uncharacterized protein. (567 aa)
	C3Z419_BRAFL	GIY-YIG domain-containing protein. (155 aa)
	C3Z2R2_BRAFL	DUF3715 domain-containing protein. (154 aa)
	C3YZR1_BRAFL	Uncharacterized protein. (490 aa)
	C3YZQ2_BRAFL	Cytosine-specific methyltransferase. (1275 aa)
	C3YZ01_BRAFL	DNA ligase. (793 aa)
	C3YYS3_BRAFL	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (598 aa)
	C3YYL7_BRAFL	MCRS_N domain-containing protein. (235 aa)
	C3YYL6_BRAFL	FHA domain-containing protein. (204 aa)
	C3YYK3_BRAFL	TPR_REGION domain-containing protein. (854 aa)
	C3YWT5_BRAFL	C2H2-type domain-containing protein. (540 aa)
	C3YWA5_BRAFL	AAA_23 domain-containing protein. (187 aa)
	C3YV86_BRAFL	Uncharacterized protein. (269 aa)
	C3YUF9_BRAFL	DUF3504 domain-containing protein. (297 aa)
	C3YTV7_BRAFL	CULLIN_2 domain-containing protein; Belongs to the cullin family. (818 aa)
	C3YTV5_BRAFL	Uncharacterized protein; Belongs to the actin family. (655 aa)
	C3YT49_BRAFL	Uncharacterized protein. (471 aa)
	C3YT48_BRAFL	Structural maintenance of chromosomes protein. (1229 aa)
	C3YQW4_BRAFL	Protein kinase domain-containing protein. (356 aa)
	C3YMQ0_BRAFL	SP-RING-type domain-containing protein. (252 aa)
	C3YL59_BRAFL	Mitogen-activated protein kinase. (321 aa)
	C3YK31_BRAFL	Uncharacterized protein. (537 aa)
	C3YK10_BRAFL	SMC hinge domain-containing protein. (1155 aa)
	C3XPS2_BRAFL	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1451 aa)
	C3XQ14_BRAFL	F-box domain-containing protein. (843 aa)
	C3XQC9_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (288 aa)
	C3XR20_BRAFL	Uncharacterized protein. (237 aa)
	C3XRW7_BRAFL	Uncharacterized protein. (1231 aa)
	C3XS08_BRAFL	Uncharacterized protein. (644 aa)
	C3XS21_BRAFL	T-complex protein 1 subunit delta. (533 aa)
	C3XSK4_BRAFL	Uncharacterized protein. (961 aa)
	C3XUK5_BRAFL	GFA domain-containing protein. (119 aa)
	C3XUW8_BRAFL	Uncharacterized protein. (270 aa)
	C3XUX2_BRAFL	Uncharacterized protein. (194 aa)
	C3XUX4_BRAFL	Uncharacterized protein. (333 aa)
	C3XUX6_BRAFL	Uncharacterized protein. (306 aa)
	C3XUX8_BRAFL	Uncharacterized protein. (332 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPS2_BRAFL	C3XRW7_BRAFL	C3XPS2	C3XRW7	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Uncharacterized protein.	0.501
C3XPS2_BRAFL	C3XYZ5_BRAFL	C3XPS2	C3XYZ5	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Protein kinase domain-containing protein.	0.455
C3XPS2_BRAFL	C3XYZ6_BRAFL	C3XPS2	C3XYZ6	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	BUB1 N-terminal domain-containing protein.	0.437
C3XPS2_BRAFL	C3Y025_BRAFL	C3XPS2	C3Y025	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Cnd3 domain-containing protein.	0.997
C3XPS2_BRAFL	C3Y1S5_BRAFL	C3XPS2	C3Y1S5	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	SMC_N domain-containing protein.	0.919
C3XPS2_BRAFL	C3YAI9_BRAFL	C3XPS2	C3YAI9	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	DNA helicase; Belongs to the MCM family.	0.690
C3XPS2_BRAFL	C3YEG7_BRAFL	C3XPS2	C3YEG7	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.436
C3XPS2_BRAFL	C3YK10_BRAFL	C3XPS2	C3YK10	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	SMC hinge domain-containing protein.	0.999
C3XPS2_BRAFL	C3YT48_BRAFL	C3XPS2	C3YT48	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Structural maintenance of chromosomes protein.	0.999
C3XPS2_BRAFL	C3YYS3_BRAFL	C3XPS2	C3YYS3	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	0.676
C3XPS2_BRAFL	C3Z5Z2_BRAFL	C3XPS2	C3Z5Z2	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	HORMA domain-containing protein.	0.450
C3XPS2_BRAFL	C3ZTM6_BRAFL	C3XPS2	C3ZTM6	Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.	SWIM-type domain-containing protein.	0.999
C3XQ14_BRAFL	C3Y212_BRAFL	C3XQ14	C3Y212	F-box domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.538
C3XQ14_BRAFL	C3ZDY2_BRAFL	C3XQ14	C3ZDY2	F-box domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.451
C3XQC9_BRAFL	C3XRW7_BRAFL	C3XQC9	C3XRW7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.683
C3XQC9_BRAFL	C3XYZ5_BRAFL	C3XQC9	C3XYZ5	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Protein kinase domain-containing protein.	0.961
C3XQC9_BRAFL	C3XYZ6_BRAFL	C3XQC9	C3XYZ6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	BUB1 N-terminal domain-containing protein.	0.979
C3XQC9_BRAFL	C3Y025_BRAFL	C3XQC9	C3Y025	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Cnd3 domain-containing protein.	0.875
C3XQC9_BRAFL	C3Y0I8_BRAFL	C3XQC9	C3Y0I8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Protein kinase domain-containing protein.	0.514
C3XQC9_BRAFL	C3Y5S4_BRAFL	C3XQC9	C3Y5S4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.810