(27 nodes) Endoplasmic reticulum-Golgi intermediate compartment membrane network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZTV5_BRAFL	GOLD domain-containing protein. (225 aa)
	C3ZSZ4_BRAFL	Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (96 aa)
	C3ZQS8_BRAFL	Uncharacterized protein. (4293 aa)
	C3ZPE2_BRAFL	Uncharacterized protein. (270 aa)
	C3ZBV8_BRAFL	Metallophos domain-containing protein. (376 aa)
	C3Z8W5_BRAFL	Uncharacterized protein. (292 aa)
	C3Z581_BRAFL	Uncharacterized protein. (343 aa)
	C3Z580_BRAFL	Uncharacterized protein. (278 aa)
	C3YUH9_BRAFL	TLC domain-containing protein. (278 aa)
	C3YUG5_BRAFL	TLC domain-containing protein. (278 aa)
	C3YU04_BRAFL	Uncharacterized protein; Belongs to the synaptobrevin family. (226 aa)
	C3YQA9_BRAFL	Uncharacterized protein. (198 aa)
	C3YQ95_BRAFL	Uncharacterized protein. (163 aa)
	C3YMQ4_BRAFL	Uncharacterized protein. (397 aa)
	C3YH01_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (331 aa)
	C3YGW1_BRAFL	Uncharacterized protein. (513 aa)
	C3YEV2_BRAFL	Uncharacterized protein. (288 aa)
	C3YDQ9_BRAFL	L-type lectin-like domain-containing protein. (519 aa)
	C3YD53_BRAFL	Uncharacterized protein. (362 aa)
	C3YAU7_BRAFL	Uncharacterized protein. (491 aa)
	C3Y5J2_BRAFL	TLC domain-containing protein. (278 aa)
	C3Y5G3_BRAFL	GLOBIN domain-containing protein; Belongs to the globin family. (291 aa)
	C3Y5G2_BRAFL	Uncharacterized protein. (336 aa)
	C3XZQ4_BRAFL	Uncharacterized protein. (282 aa)
	C3XVK2_BRAFL	GOLD domain-containing protein. (203 aa)
	C3XV76_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (769 aa)
	C3XUK2_BRAFL	Uncharacterized protein. (199 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XUK2_BRAFL	C3ZSZ4_BRAFL	C3XUK2	C3ZSZ4	Uncharacterized protein.	Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family.	0.826
C3XVK2_BRAFL	C3YDQ9_BRAFL	C3XVK2	C3YDQ9	GOLD domain-containing protein.	L-type lectin-like domain-containing protein.	0.844
C3XVK2_BRAFL	C3YH01_BRAFL	C3XVK2	C3YH01	GOLD domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.792
C3XVK2_BRAFL	C3YU04_BRAFL	C3XVK2	C3YU04	GOLD domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.746
C3XVK2_BRAFL	C3Z580_BRAFL	C3XVK2	C3Z580	GOLD domain-containing protein.	Uncharacterized protein.	0.736
C3XVK2_BRAFL	C3Z581_BRAFL	C3XVK2	C3Z581	GOLD domain-containing protein.	Uncharacterized protein.	0.736
C3XVK2_BRAFL	C3ZPE2_BRAFL	C3XVK2	C3ZPE2	GOLD domain-containing protein.	Uncharacterized protein.	0.736
C3XVK2_BRAFL	C3ZTV5_BRAFL	C3XVK2	C3ZTV5	GOLD domain-containing protein.	GOLD domain-containing protein.	0.581
C3XZQ4_BRAFL	C3YH01_BRAFL	C3XZQ4	C3YH01	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.547
C3Y5G2_BRAFL	C3YMQ4_BRAFL	C3Y5G2	C3YMQ4	Uncharacterized protein.	Uncharacterized protein.	0.931
C3Y5G3_BRAFL	C3YMQ4_BRAFL	C3Y5G3	C3YMQ4	GLOBIN domain-containing protein; Belongs to the globin family.	Uncharacterized protein.	0.931
C3YDQ9_BRAFL	C3XVK2_BRAFL	C3YDQ9	C3XVK2	L-type lectin-like domain-containing protein.	GOLD domain-containing protein.	0.844
C3YDQ9_BRAFL	C3YEV2_BRAFL	C3YDQ9	C3YEV2	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.677
C3YDQ9_BRAFL	C3YH01_BRAFL	C3YDQ9	C3YH01	L-type lectin-like domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.790
C3YDQ9_BRAFL	C3YU04_BRAFL	C3YDQ9	C3YU04	L-type lectin-like domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.854
C3YDQ9_BRAFL	C3Z580_BRAFL	C3YDQ9	C3Z580	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.409
C3YDQ9_BRAFL	C3Z581_BRAFL	C3YDQ9	C3Z581	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.409
C3YDQ9_BRAFL	C3Z8W5_BRAFL	C3YDQ9	C3Z8W5	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.474
C3YDQ9_BRAFL	C3ZPE2_BRAFL	C3YDQ9	C3ZPE2	L-type lectin-like domain-containing protein.	Uncharacterized protein.	0.409
C3YEV2_BRAFL	C3YDQ9_BRAFL	C3YEV2	C3YDQ9	Uncharacterized protein.	L-type lectin-like domain-containing protein.	0.677