(24 nodes) Tumor necrosis factor-mediated signaling pathway network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZG33_BRAFL	MATH domain-containing protein. (467 aa)
	C3ZG34_BRAFL	Uncharacterized protein. (552 aa)
	C3ZG35_BRAFL	Uncharacterized protein. (658 aa)
	C3ZYU7_BRAFL	MATH domain-containing protein. (107 aa)
	C3ZXG1_BRAFL	Uncharacterized protein. (122 aa)
	C3ZG37_BRAFL	Uncharacterized protein. (631 aa)
	C3ZN65_BRAFL	Uncharacterized protein. (147 aa)
	C3ZH16_BRAFL	Uncharacterized protein. (473 aa)
	C3ZG42_BRAFL	Uncharacterized protein. (482 aa)
	C3ZG40_BRAFL	Uncharacterized protein. (503 aa)
	C3ZG39_BRAFL	Uncharacterized protein. (549 aa)
	C3ZG38_BRAFL	MATH domain-containing protein. (373 aa)
	C3ZG30_BRAFL	MATH domain-containing protein. (353 aa)
	C3Z9D5_BRAFL	DUF953 domain-containing protein. (113 aa)
	C3Z1H6_BRAFL	SEFIR domain-containing protein. (238 aa)
	C3Z1H5_BRAFL	SEFIR domain-containing protein. (163 aa)
	C3Z1F1_BRAFL	Uncharacterized protein. (468 aa)
	C3YRU2_BRAFL	Protein kinase domain-containing protein. (168 aa)
	C3YJ83_BRAFL	RING-type domain-containing protein. (180 aa)
	C3YI94_BRAFL	Uncharacterized protein. (101 aa)
	C3YFT5_BRAFL	Protein kinase domain-containing protein. (755 aa)
	C3YAX5_BRAFL	COMM domain-containing protein. (202 aa)
	C3Y0R3_BRAFL	Uncharacterized protein. (532 aa)
	C3ZG31_BRAFL	Uncharacterized protein. (474 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y0R3_BRAFL	C3YFT5_BRAFL	C3Y0R3	C3YFT5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.489
C3Y0R3_BRAFL	C3YI94_BRAFL	C3Y0R3	C3YI94	Uncharacterized protein.	Uncharacterized protein.	0.462
C3Y0R3_BRAFL	C3YJ83_BRAFL	C3Y0R3	C3YJ83	Uncharacterized protein.	RING-type domain-containing protein.	0.462
C3Y0R3_BRAFL	C3Z1F1_BRAFL	C3Y0R3	C3Z1F1	Uncharacterized protein.	Uncharacterized protein.	0.723
C3Y0R3_BRAFL	C3Z1H5_BRAFL	C3Y0R3	C3Z1H5	Uncharacterized protein.	SEFIR domain-containing protein.	0.455
C3Y0R3_BRAFL	C3Z1H6_BRAFL	C3Y0R3	C3Z1H6	Uncharacterized protein.	SEFIR domain-containing protein.	0.455
C3Y0R3_BRAFL	C3ZG31_BRAFL	C3Y0R3	C3ZG31	Uncharacterized protein.	Uncharacterized protein.	0.485
C3Y0R3_BRAFL	C3ZG34_BRAFL	C3Y0R3	C3ZG34	Uncharacterized protein.	Uncharacterized protein.	0.491
C3Y0R3_BRAFL	C3ZG35_BRAFL	C3Y0R3	C3ZG35	Uncharacterized protein.	Uncharacterized protein.	0.495
C3Y0R3_BRAFL	C3ZG37_BRAFL	C3Y0R3	C3ZG37	Uncharacterized protein.	Uncharacterized protein.	0.491
C3Y0R3_BRAFL	C3ZG38_BRAFL	C3Y0R3	C3ZG38	Uncharacterized protein.	MATH domain-containing protein.	0.483
C3Y0R3_BRAFL	C3ZG39_BRAFL	C3Y0R3	C3ZG39	Uncharacterized protein.	Uncharacterized protein.	0.490
C3Y0R3_BRAFL	C3ZG40_BRAFL	C3Y0R3	C3ZG40	Uncharacterized protein.	Uncharacterized protein.	0.490
C3Y0R3_BRAFL	C3ZG42_BRAFL	C3Y0R3	C3ZG42	Uncharacterized protein.	Uncharacterized protein.	0.485
C3Y0R3_BRAFL	C3ZH16_BRAFL	C3Y0R3	C3ZH16	Uncharacterized protein.	Uncharacterized protein.	0.467
C3Y0R3_BRAFL	C3ZN65_BRAFL	C3Y0R3	C3ZN65	Uncharacterized protein.	Uncharacterized protein.	0.462
C3Y0R3_BRAFL	C3ZXG1_BRAFL	C3Y0R3	C3ZXG1	Uncharacterized protein.	Uncharacterized protein.	0.489
C3Y0R3_BRAFL	C3ZYU7_BRAFL	C3Y0R3	C3ZYU7	Uncharacterized protein.	MATH domain-containing protein.	0.456
C3YFT5_BRAFL	C3Y0R3_BRAFL	C3YFT5	C3Y0R3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.489
C3YFT5_BRAFL	C3YI94_BRAFL	C3YFT5	C3YI94	Protein kinase domain-containing protein.	Uncharacterized protein.	0.617