(13 nodes) Centromere complex assembly network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YIL0_BRAFL	Uncharacterized protein. (943 aa)
	C3XQC9_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (288 aa)
	C3XRW7_BRAFL	Uncharacterized protein. (1231 aa)
	C3XU84_BRAFL	Uncharacterized protein. (355 aa)
	C3XUK5_BRAFL	GFA domain-containing protein. (119 aa)
	C3Y1F4_BRAFL	Uncharacterized protein. (288 aa)
	C3Y212_BRAFL	Deacetylase sirtuin-type domain-containing protein. (414 aa)
	C3YH45_BRAFL	Uncharacterized protein. (507 aa)
	C3YII8_BRAFL	CENP-C_C domain-containing protein. (1118 aa)
	C3YXD2_BRAFL	Mis18 domain-containing protein. (303 aa)
	C3ZYW2_BRAFL	Uncharacterized protein. (90 aa)
	C3ZYP9_BRAFL	Uncharacterized protein. (90 aa)
	C3ZE81_BRAFL	Uncharacterized protein. (517 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQC9_BRAFL	C3XRW7_BRAFL	C3XQC9	C3XRW7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.683
C3XQC9_BRAFL	C3XU84_BRAFL	C3XQC9	C3XU84	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.460
C3XQC9_BRAFL	C3Y1F4_BRAFL	C3XQC9	C3Y1F4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.495
C3XQC9_BRAFL	C3YH45_BRAFL	C3XQC9	C3YH45	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.689
C3XQC9_BRAFL	C3YII8_BRAFL	C3XQC9	C3YII8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	CENP-C_C domain-containing protein.	0.505
C3XQC9_BRAFL	C3ZE81_BRAFL	C3XQC9	C3ZE81	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.665
C3XQC9_BRAFL	C3ZYP9_BRAFL	C3XQC9	C3ZYP9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.728
C3XQC9_BRAFL	C3ZYW2_BRAFL	C3XQC9	C3ZYW2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.728
C3XRW7_BRAFL	C3XQC9_BRAFL	C3XRW7	C3XQC9	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.683
C3XRW7_BRAFL	C3YH45_BRAFL	C3XRW7	C3YH45	Uncharacterized protein.	Uncharacterized protein.	0.480
C3XRW7_BRAFL	C3ZE81_BRAFL	C3XRW7	C3ZE81	Uncharacterized protein.	Uncharacterized protein.	0.440
C3XRW7_BRAFL	C3ZYP9_BRAFL	C3XRW7	C3ZYP9	Uncharacterized protein.	Uncharacterized protein.	0.541
C3XRW7_BRAFL	C3ZYW2_BRAFL	C3XRW7	C3ZYW2	Uncharacterized protein.	Uncharacterized protein.	0.541
C3XU84_BRAFL	C3XQC9_BRAFL	C3XU84	C3XQC9	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.460
C3XU84_BRAFL	C3Y1F4_BRAFL	C3XU84	C3Y1F4	Uncharacterized protein.	Uncharacterized protein.	0.989
C3XU84_BRAFL	C3YH45_BRAFL	C3XU84	C3YH45	Uncharacterized protein.	Uncharacterized protein.	0.422
C3XU84_BRAFL	C3YII8_BRAFL	C3XU84	C3YII8	Uncharacterized protein.	CENP-C_C domain-containing protein.	0.971
C3XU84_BRAFL	C3YXD2_BRAFL	C3XU84	C3YXD2	Uncharacterized protein.	Mis18 domain-containing protein.	0.765
C3XU84_BRAFL	C3ZE81_BRAFL	C3XU84	C3ZE81	Uncharacterized protein.	Uncharacterized protein.	0.992
C3XU84_BRAFL	C3ZYP9_BRAFL	C3XU84	C3ZYP9	Uncharacterized protein.	Uncharacterized protein.	0.439