(64 nodes) Methyltransferase complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YN69_BRAFL	SAM-dependent MTase TRM10-type domain-containing protein. (230 aa)
	Q8T776_BRAFL	WD_REPEATS_REGION domain-containing protein. (353 aa)
	C4A021_BRAFL	WD_REPEATS_REGION domain-containing protein. (429 aa)
	C3ZYE0_BRAFL	Uncharacterized protein. (1256 aa)
	C3ZYC5_BRAFL	YL1_C domain-containing protein. (181 aa)
	C3ZV25_BRAFL	Uncharacterized protein. (223 aa)
	C3ZV23_BRAFL	Uncharacterized protein. (224 aa)
	C3ZTG7_BRAFL	Mtf2_C domain-containing protein. (391 aa)
	C3ZTG5_BRAFL	PHD-type domain-containing protein. (427 aa)
	C3ZRS9_BRAFL	MTS domain-containing protein. (219 aa)
	C3ZRS8_BRAFL	Uncharacterized protein. (193 aa)
	C3ZLT4_BRAFL	Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (563 aa)
	C3ZL20_BRAFL	Uncharacterized protein. (2482 aa)
	C3ZKP7_BRAFL	Uncharacterized protein. (612 aa)
	C3ZKN5_BRAFL	Enhancer of rudimentary homolog; May have a role in the cell cycle. (104 aa)
	C3ZH30_BRAFL	Uncharacterized protein. (1891 aa)
	C3ZEY7_BRAFL	TAF domain-containing protein. (653 aa)
	C3ZET0_BRAFL	Uncharacterized protein. (813 aa)
	C3ZDZ5_BRAFL	Uncharacterized protein. (235 aa)
	C3ZDP8_BRAFL	Uncharacterized protein. (1318 aa)
	C3ZD89_BRAFL	SANT domain-containing protein. (153 aa)
	C3ZC78_BRAFL	WD_REPEATS_REGION domain-containing protein. (222 aa)
	C3ZAN8_BRAFL	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (254 aa)
	C3ZAD7_BRAFL	Uncharacterized protein. (789 aa)
	C3Z948_BRAFL	Sm domain-containing protein. (87 aa)
	C3Z8G3_BRAFL	Ipi1_N domain-containing protein. (874 aa)
	C3Z889_BRAFL	Nucleic_acid_bd domain-containing protein. (72 aa)
	C3Z7L6_BRAFL	Nop domain-containing protein. (498 aa)
	C3Z6W6_BRAFL	Uncharacterized protein. (673 aa)
	C3Z2Q2_BRAFL	Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (260 aa)
	C3Z2G5_BRAFL	WD_REPEATS_REGION domain-containing protein. (495 aa)
	C3YYL7_BRAFL	MCRS_N domain-containing protein. (235 aa)
	C3YYL6_BRAFL	FHA domain-containing protein. (204 aa)
	C3YLD5_BRAFL	VIR_N domain-containing protein. (1639 aa)
	C3XQV0_BRAFL	Small nuclear ribonucleoprotein Sm D3. (120 aa)
	C3XQZ7_BRAFL	VEFS-Box domain-containing protein. (581 aa)
	C3XR66_BRAFL	Uncharacterized protein. (105 aa)
	C3XR86_BRAFL	Uncharacterized protein. (313 aa)
	C3XR87_BRAFL	PHD-type domain-containing protein. (154 aa)
	C3XRZ9_BRAFL	BHLH domain-containing protein. (115 aa)
	C3XTF6_BRAFL	Small nuclear ribonucleoprotein Sm D2. (116 aa)
	C3XU33_BRAFL	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (627 aa)
	C3XUB0_BRAFL	Uncharacterized protein. (328 aa)
	C3XW13_BRAFL	WD_REPEATS_REGION domain-containing protein. (346 aa)
	C3XZ39_BRAFL	Uncharacterized protein. (101 aa)
	C3XZG9_BRAFL	Uncharacterized protein. (422 aa)
	C3XZZ6_BRAFL	Uncharacterized protein. (175 aa)
	C3Y0B5_BRAFL	Uncharacterized protein. (246 aa)
	C3Y0D5_BRAFL	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (300 aa)
	C3Y6A4_BRAFL	RuvB-like helicase; Belongs to the RuvB family. (468 aa)
	C3YCV4_BRAFL	CXC domain-containing protein. (625 aa)
	C3YCV5_BRAFL	SET domain-containing protein. (85 aa)
	C3YFD7_BRAFL	Uncharacterized protein; Belongs to the MT-A70-like family. (568 aa)
	C3YFH6_BRAFL	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (121 aa)
	C3YFU8_BRAFL	Uncharacterized protein; Belongs to the MT-A70-like family. (164 aa)
	C3YGG5_BRAFL	Small nuclear ribonucleoprotein-associated protein. (219 aa)
	RdhH	Uncharacterized protein. (245 aa)
	C3YID2_BRAFL	WD_REPEATS_REGION domain-containing protein. (187 aa)
	C3YL80_BRAFL	B30.2/SPRY domain-containing protein. (592 aa)
	C3YXD4_BRAFL	Uncharacterized protein. (439 aa)
	C3YX36_BRAFL	Uncharacterized protein. (160 aa)
	C3YV92_BRAFL	WD_REPEATS_REGION domain-containing protein. (276 aa)
	C3YUE2_BRAFL	Uncharacterized protein. (1799 aa)
	C3YLP2_BRAFL	RuvB-like helicase; Belongs to the RuvB family. (456 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQV0_BRAFL	C3XR66_BRAFL	C3XQV0	C3XR66	Small nuclear ribonucleoprotein Sm D3.	Uncharacterized protein.	0.509
C3XQV0_BRAFL	C3XTF6_BRAFL	C3XQV0	C3XTF6	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D2.	0.999
C3XQV0_BRAFL	C3XU33_BRAFL	C3XQV0	C3XU33	Small nuclear ribonucleoprotein Sm D3.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.820
C3XQV0_BRAFL	C3YFH6_BRAFL	C3XQV0	C3YFH6	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
C3XQV0_BRAFL	C3YGG5_BRAFL	C3XQV0	C3YGG5	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein-associated protein.	0.999
C3XQV0_BRAFL	C3YLP2_BRAFL	C3XQV0	C3YLP2	Small nuclear ribonucleoprotein Sm D3.	RuvB-like helicase; Belongs to the RuvB family.	0.648
C3XQV0_BRAFL	C3Z7L6_BRAFL	C3XQV0	C3Z7L6	Small nuclear ribonucleoprotein Sm D3.	Nop domain-containing protein.	0.981
C3XQV0_BRAFL	C3Z948_BRAFL	C3XQV0	C3Z948	Small nuclear ribonucleoprotein Sm D3.	Sm domain-containing protein.	0.999
C3XQV0_BRAFL	C3ZC78_BRAFL	C3XQV0	C3ZC78	Small nuclear ribonucleoprotein Sm D3.	WD_REPEATS_REGION domain-containing protein.	0.736
C3XQV0_BRAFL	C3ZDZ5_BRAFL	C3XQV0	C3ZDZ5	Small nuclear ribonucleoprotein Sm D3.	Uncharacterized protein.	0.961
C3XQV0_BRAFL	C3ZKN5_BRAFL	C3XQV0	C3ZKN5	Small nuclear ribonucleoprotein Sm D3.	Enhancer of rudimentary homolog; May have a role in the cell cycle.	0.509
C3XQZ7_BRAFL	C3XR86_BRAFL	C3XQZ7	C3XR86	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.526
C3XQZ7_BRAFL	C3XR87_BRAFL	C3XQZ7	C3XR87	VEFS-Box domain-containing protein.	PHD-type domain-containing protein.	0.526
C3XQZ7_BRAFL	C3YCV4_BRAFL	C3XQZ7	C3YCV4	VEFS-Box domain-containing protein.	CXC domain-containing protein.	0.999
C3XQZ7_BRAFL	C3YCV5_BRAFL	C3XQZ7	C3YCV5	VEFS-Box domain-containing protein.	SET domain-containing protein.	0.986
C3XQZ7_BRAFL	C3YID2_BRAFL	C3XQZ7	C3YID2	VEFS-Box domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.986
C3XQZ7_BRAFL	C3YXD4_BRAFL	C3XQZ7	C3YXD4	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.999
C3XQZ7_BRAFL	C3ZDP8_BRAFL	C3XQZ7	C3ZDP8	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.975
C3XQZ7_BRAFL	C3ZL20_BRAFL	C3XQZ7	C3ZL20	VEFS-Box domain-containing protein.	Uncharacterized protein.	0.546
C3XQZ7_BRAFL	C3ZTG5_BRAFL	C3XQZ7	C3ZTG5	VEFS-Box domain-containing protein.	PHD-type domain-containing protein.	0.935