(37 nodes) Methylated histone binding network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZTG5_BRAFL	PHD-type domain-containing protein. (427 aa)
	C3ZTG7_BRAFL	Mtf2_C domain-containing protein. (391 aa)
	C3ZW21_BRAFL	Uncharacterized protein. (624 aa)
	C4A0R5_BRAFL	Inhibitor of growth protein. (230 aa)
	C3ZY48_BRAFL	Chromo domain-containing protein. (56 aa)
	C3YH69_BRAFL	Uncharacterized protein. (2862 aa)
	C3YLR6_BRAFL	Uncharacterized protein. (142 aa)
	C3YMN6_BRAFL	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1278 aa)
	C3YMT0_BRAFL	Uncharacterized protein. (292 aa)
	C3YBF4_BRAFL	Uncharacterized protein. (2359 aa)
	C3XXI8_BRAFL	MYND-type domain-containing protein. (719 aa)
	C3XX59_BRAFL	Uncharacterized protein. (816 aa)
	C3XWU0_BRAFL	PWWP domain-containing protein. (243 aa)
	C3XVY7_BRAFL	CW-type domain-containing protein. (465 aa)
	C3XUW8_BRAFL	Uncharacterized protein. (270 aa)
	C3XPH5_BRAFL	Uncharacterized protein. (501 aa)
	C3YBX8_BRAFL	Uncharacterized protein. (714 aa)
	C3YVE1_BRAFL	Uncharacterized protein. (984 aa)
	C3YVL7_BRAFL	PHD-type domain-containing protein. (68 aa)
	C3YZA3_BRAFL	FCS-type domain-containing protein. (543 aa)
	C3YZC3_BRAFL	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (307 aa)
	C3YZR1_BRAFL	Uncharacterized protein. (490 aa)
	C3Z1B1_BRAFL	Uncharacterized protein. (176 aa)
	C3Z2G5_BRAFL	WD_REPEATS_REGION domain-containing protein. (495 aa)
	C3Z2H0_BRAFL	Cnd1 domain-containing protein. (1141 aa)
	C3Z479_BRAFL	WD_REPEATS_REGION domain-containing protein. (742 aa)
	C3Z4P2_BRAFL	Inhibitor of growth protein. (281 aa)
	C3Z6P7_BRAFL	Chromo domain-containing protein. (431 aa)
	C3Z6P8_BRAFL	Chromo domain-containing protein. (369 aa)
	C3Z6P9_BRAFL	Chromo domain-containing protein. (389 aa)
	C3Z809_BRAFL	Uncharacterized protein. (720 aa)
	C3Z8L5_BRAFL	Uncharacterized protein. (559 aa)
	C3ZAD7_BRAFL	Uncharacterized protein. (789 aa)
	C3ZBE0_BRAFL	WD_REPEATS_REGION domain-containing protein. (477 aa)
	C3ZHW5_BRAFL	SGF29 C-terminal domain-containing protein. (339 aa)
	C3ZMT1_BRAFL	Uncharacterized protein. (2552 aa)
	C3ZSF3_BRAFL	Inhibitor of growth protein. (255 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XWU0_BRAFL	C3Z1B1_BRAFL	C3XWU0	C3Z1B1	PWWP domain-containing protein.	Uncharacterized protein.	0.569
C3XWU0_BRAFL	C3ZTG5_BRAFL	C3XWU0	C3ZTG5	PWWP domain-containing protein.	PHD-type domain-containing protein.	0.503
C3XWU0_BRAFL	C3ZTG7_BRAFL	C3XWU0	C3ZTG7	PWWP domain-containing protein.	Mtf2_C domain-containing protein.	0.503
C3YVE1_BRAFL	C3Z1B1_BRAFL	C3YVE1	C3Z1B1	Uncharacterized protein.	Uncharacterized protein.	0.419
C3YZA3_BRAFL	C3Z1B1_BRAFL	C3YZA3	C3Z1B1	FCS-type domain-containing protein.	Uncharacterized protein.	0.530
C3YZA3_BRAFL	C3Z6P7_BRAFL	C3YZA3	C3Z6P7	FCS-type domain-containing protein.	Chromo domain-containing protein.	0.456
C3YZA3_BRAFL	C3Z6P8_BRAFL	C3YZA3	C3Z6P8	FCS-type domain-containing protein.	Chromo domain-containing protein.	0.456
C3YZA3_BRAFL	C3Z6P9_BRAFL	C3YZA3	C3Z6P9	FCS-type domain-containing protein.	Chromo domain-containing protein.	0.456
C3YZA3_BRAFL	C3ZAD7_BRAFL	C3YZA3	C3ZAD7	FCS-type domain-containing protein.	Uncharacterized protein.	0.439
C3YZA3_BRAFL	C3ZY48_BRAFL	C3YZA3	C3ZY48	FCS-type domain-containing protein.	Chromo domain-containing protein.	0.516
C3YZC3_BRAFL	C3ZBE0_BRAFL	C3YZC3	C3ZBE0	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	WD_REPEATS_REGION domain-containing protein.	0.687
C3YZR1_BRAFL	C3Z1B1_BRAFL	C3YZR1	C3Z1B1	Uncharacterized protein.	Uncharacterized protein.	0.487
C3YZR1_BRAFL	C3ZMT1_BRAFL	C3YZR1	C3ZMT1	Uncharacterized protein.	Uncharacterized protein.	0.537
C3Z1B1_BRAFL	C3XWU0_BRAFL	C3Z1B1	C3XWU0	Uncharacterized protein.	PWWP domain-containing protein.	0.569
C3Z1B1_BRAFL	C3YVE1_BRAFL	C3Z1B1	C3YVE1	Uncharacterized protein.	Uncharacterized protein.	0.419
C3Z1B1_BRAFL	C3YZA3_BRAFL	C3Z1B1	C3YZA3	Uncharacterized protein.	FCS-type domain-containing protein.	0.530
C3Z1B1_BRAFL	C3YZR1_BRAFL	C3Z1B1	C3YZR1	Uncharacterized protein.	Uncharacterized protein.	0.487
C3Z1B1_BRAFL	C3ZAD7_BRAFL	C3Z1B1	C3ZAD7	Uncharacterized protein.	Uncharacterized protein.	0.730
C3Z2G5_BRAFL	C3Z809_BRAFL	C3Z2G5	C3Z809	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.502
C3Z2G5_BRAFL	C3ZAD7_BRAFL	C3Z2G5	C3ZAD7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998