(23 nodes) Hair cell differentiation network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XTE8_BRAFL	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1237 aa)
	C3ZYI6_BRAFL	Uncharacterized protein. (369 aa)
	C3ZXE5_BRAFL	Uncharacterized protein. (561 aa)
	C3ZWT7_BRAFL	Uncharacterized protein. (92 aa)
	C3ZWT6_BRAFL	PDZ domain-containing protein. (90 aa)
	C3ZHM9_BRAFL	Uncharacterized protein. (514 aa)
	C3Z5F1_BRAFL	BHLH domain-containing protein. (56 aa)
	C3Z217_BRAFL	PDZ domain-containing protein. (254 aa)
	C3Z216_BRAFL	Uncharacterized protein. (487 aa)
	C3YWV0_BRAFL	Uncharacterized protein. (657 aa)
	C3YUU9_BRAFL	Ion_trans domain-containing protein; Belongs to the potassium channel family. (157 aa)
	C3YUU8_BRAFL	Ion_trans_2 domain-containing protein. (111 aa)
	C3YUU7_BRAFL	KCNQ_channel domain-containing protein. (66 aa)
	C3YMW6_BRAFL	Uncharacterized protein. (1065 aa)
	C3YK50_BRAFL	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (646 aa)
	C3YJ32_BRAFL	Uncharacterized protein. (1280 aa)
	C3YBY7_BRAFL	Uncharacterized protein. (798 aa)
	C3Y0H1_BRAFL	Helicase ATP-binding domain-containing protein. (763 aa)
	C3Y0F7_BRAFL	Uncharacterized protein. (2571 aa)
	C3Y0F6_BRAFL	Uncharacterized protein. (2807 aa)
	C3XWA6_BRAFL	Uncharacterized protein. (230 aa)
	C3XW39_BRAFL	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (163 aa)
	C3XRV3_BRAFL	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (737 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTE8_BRAFL	C3Y0F6_BRAFL	C3XTE8	C3Y0F6	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.429
C3XTE8_BRAFL	C3Y0F7_BRAFL	C3XTE8	C3Y0F7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.429
C3XWA6_BRAFL	C3YK50_BRAFL	C3XWA6	C3YK50	Uncharacterized protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.458
C3Y0F6_BRAFL	C3XTE8_BRAFL	C3Y0F6	C3XTE8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.429
C3Y0F6_BRAFL	C3YJ32_BRAFL	C3Y0F6	C3YJ32	Uncharacterized protein.	Uncharacterized protein.	0.496
C3Y0F7_BRAFL	C3XTE8_BRAFL	C3Y0F7	C3XTE8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.429
C3Y0F7_BRAFL	C3YJ32_BRAFL	C3Y0F7	C3YJ32	Uncharacterized protein.	Uncharacterized protein.	0.496
C3Y0H1_BRAFL	C3YBY7_BRAFL	C3Y0H1	C3YBY7	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.998
C3YBY7_BRAFL	C3Y0H1_BRAFL	C3YBY7	C3Y0H1	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.998
C3YJ32_BRAFL	C3Y0F6_BRAFL	C3YJ32	C3Y0F6	Uncharacterized protein.	Uncharacterized protein.	0.496
C3YJ32_BRAFL	C3Y0F7_BRAFL	C3YJ32	C3Y0F7	Uncharacterized protein.	Uncharacterized protein.	0.496
C3YJ32_BRAFL	C3Z216_BRAFL	C3YJ32	C3Z216	Uncharacterized protein.	Uncharacterized protein.	0.660
C3YJ32_BRAFL	C3Z217_BRAFL	C3YJ32	C3Z217	Uncharacterized protein.	PDZ domain-containing protein.	0.660
C3YJ32_BRAFL	C3ZWT6_BRAFL	C3YJ32	C3ZWT6	Uncharacterized protein.	PDZ domain-containing protein.	0.646
C3YJ32_BRAFL	C3ZYI6_BRAFL	C3YJ32	C3ZYI6	Uncharacterized protein.	Uncharacterized protein.	0.646
C3YK50_BRAFL	C3XWA6_BRAFL	C3YK50	C3XWA6	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.458
C3YUU8_BRAFL	C3YUU9_BRAFL	C3YUU8	C3YUU9	Ion_trans_2 domain-containing protein.	Ion_trans domain-containing protein; Belongs to the potassium channel family.	0.473
C3YUU9_BRAFL	C3YUU8_BRAFL	C3YUU9	C3YUU8	Ion_trans domain-containing protein; Belongs to the potassium channel family.	Ion_trans_2 domain-containing protein.	0.473
C3Z216_BRAFL	C3YJ32_BRAFL	C3Z216	C3YJ32	Uncharacterized protein.	Uncharacterized protein.	0.660
C3Z216_BRAFL	C3Z217_BRAFL	C3Z216	C3Z217	Uncharacterized protein.	PDZ domain-containing protein.	0.540