(21 nodes) Cellular response to decreased oxygen levels network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YIY1_BRAFL	Uncharacterized protein. (249 aa)
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3YMQ8_BRAFL	Uncharacterized protein. (161 aa)
	C3YZW2_BRAFL	Uncharacterized protein. (485 aa)
	C3Z3T3_BRAFL	Deacetylase sirtuin-type domain-containing protein. (325 aa)
	C3Z4Y1_BRAFL	Uncharacterized protein. (272 aa)
	C3Z610_BRAFL	JmjC domain-containing protein. (223 aa)
	C3ZLL3_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1049 aa)
	C3ZLL7_BRAFL	DUF3385 domain-containing protein. (1400 aa)
	C3ZWS9_BRAFL	EGF-like domain-containing protein. (710 aa)
	C3XYX4_BRAFL	Alpha-type protein kinase domain-containing protein. (601 aa)
	C3Y0V0_BRAFL	Uncharacterized protein. (993 aa)
	C3Y975_BRAFL	Uncharacterized protein. (395 aa)
	C3XS48_BRAFL	Uncharacterized protein. (336 aa)
	C3XRN1_BRAFL	Uncharacterized protein. (1244 aa)
	C3XVA7_BRAFL	WD_REPEATS_REGION domain-containing protein. (434 aa)
	C3XY37_BRAFL	Uncharacterized protein; Belongs to the complex I LYR family. (69 aa)
	C3YH16_BRAFL	Uncharacterized protein. (379 aa)
	C3XPY9_BRAFL	Protein kinase domain-containing protein. (347 aa)
	C3XQF3_BRAFL	Uncharacterized protein. (564 aa)
	C3XR53_BRAFL	Fe2OG dioxygenase domain-containing protein. (200 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPY9_BRAFL	C3YKX2_BRAFL	C3XPY9	C3YKX2	Protein kinase domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.538
C3XPY9_BRAFL	C3Z3T3_BRAFL	C3XPY9	C3Z3T3	Protein kinase domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.535
C3XPY9_BRAFL	C3Z4Y1_BRAFL	C3XPY9	C3Z4Y1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.431
C3XR53_BRAFL	C3XS48_BRAFL	C3XR53	C3XS48	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.969
C3XS48_BRAFL	C3XR53_BRAFL	C3XS48	C3XR53	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.969
C3XS48_BRAFL	C3YH16_BRAFL	C3XS48	C3YH16	Uncharacterized protein.	Uncharacterized protein.	0.969
C3XS48_BRAFL	C3YKX2_BRAFL	C3XS48	C3YKX2	Uncharacterized protein.	Deacetylase sirtuin-type domain-containing protein.	0.567
C3XS48_BRAFL	C3Z610_BRAFL	C3XS48	C3Z610	Uncharacterized protein.	JmjC domain-containing protein.	0.960
C3Y0V0_BRAFL	C3Z4Y1_BRAFL	C3Y0V0	C3Z4Y1	Uncharacterized protein.	Uncharacterized protein.	0.623
C3YH16_BRAFL	C3XS48_BRAFL	C3YH16	C3XS48	Uncharacterized protein.	Uncharacterized protein.	0.969
C3YKX2_BRAFL	C3XPY9_BRAFL	C3YKX2	C3XPY9	Deacetylase sirtuin-type domain-containing protein.	Protein kinase domain-containing protein.	0.538
C3YKX2_BRAFL	C3XS48_BRAFL	C3YKX2	C3XS48	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.567
C3YKX2_BRAFL	C3Z3T3_BRAFL	C3YKX2	C3Z3T3	Deacetylase sirtuin-type domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.641
C3YKX2_BRAFL	C3ZLL3_BRAFL	C3YKX2	C3ZLL3	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.502
C3YKX2_BRAFL	C3ZLL7_BRAFL	C3YKX2	C3ZLL7	Deacetylase sirtuin-type domain-containing protein.	DUF3385 domain-containing protein.	0.502
C3Z3T3_BRAFL	C3XPY9_BRAFL	C3Z3T3	C3XPY9	Deacetylase sirtuin-type domain-containing protein.	Protein kinase domain-containing protein.	0.535
C3Z3T3_BRAFL	C3YKX2_BRAFL	C3Z3T3	C3YKX2	Deacetylase sirtuin-type domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.641
C3Z4Y1_BRAFL	C3XPY9_BRAFL	C3Z4Y1	C3XPY9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.431
C3Z4Y1_BRAFL	C3Y0V0_BRAFL	C3Z4Y1	C3Y0V0	Uncharacterized protein.	Uncharacterized protein.	0.623
C3Z4Y1_BRAFL	C3ZLL3_BRAFL	C3Z4Y1	C3ZLL3	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.811