(14 nodes) ERBB signaling pathway network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZQP6_BRAFL	Peptidase M12B domain-containing protein. (99 aa)
	C3XRV7_BRAFL	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1022 aa)
	C3XU27_BRAFL	Uncharacterized protein. (1078 aa)
	C3Y1A5_BRAFL	Focal_AT domain-containing protein. (137 aa)
	C3Y1A6_BRAFL	Uncharacterized protein. (977 aa)
	C3YDH7_BRAFL	Uncharacterized protein. (868 aa)
	C3YJ52_BRAFL	Phosphoinositide phospholipase C. (1255 aa)
	C3YZ48_BRAFL	Uncharacterized protein. (839 aa)
	C3Z4R3_BRAFL	Uncharacterized protein. (272 aa)
	C3ZBX6_BRAFL	Uncharacterized protein. (668 aa)
	C3ZD49_BRAFL	CABIT domain-containing protein. (637 aa)
	C3ZD51_BRAFL	CABIT domain-containing protein. (386 aa)
	C3ZD52_BRAFL	CABIT domain-containing protein. (614 aa)
	C3ZQP5_BRAFL	Disintegrin domain-containing protein. (277 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XU27_BRAFL	C3YZ48_BRAFL	C3XU27	C3YZ48	Uncharacterized protein.	Uncharacterized protein.	0.432
C3Y1A5_BRAFL	C3YZ48_BRAFL	C3Y1A5	C3YZ48	Focal_AT domain-containing protein.	Uncharacterized protein.	0.666
C3Y1A6_BRAFL	C3YZ48_BRAFL	C3Y1A6	C3YZ48	Uncharacterized protein.	Uncharacterized protein.	0.666
C3YZ48_BRAFL	C3XU27_BRAFL	C3YZ48	C3XU27	Uncharacterized protein.	Uncharacterized protein.	0.432
C3YZ48_BRAFL	C3Y1A5_BRAFL	C3YZ48	C3Y1A5	Uncharacterized protein.	Focal_AT domain-containing protein.	0.666
C3YZ48_BRAFL	C3Y1A6_BRAFL	C3YZ48	C3Y1A6	Uncharacterized protein.	Uncharacterized protein.	0.666
C3YZ48_BRAFL	C3ZBX6_BRAFL	C3YZ48	C3ZBX6	Uncharacterized protein.	Uncharacterized protein.	0.974
C3ZBX6_BRAFL	C3YZ48_BRAFL	C3ZBX6	C3YZ48	Uncharacterized protein.	Uncharacterized protein.	0.974