(88 nodes) Wound healing network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C4A096_BRAFL	Uncharacterized protein. (200 aa)
	C3XRW5_BRAFL	Protein kinase domain-containing protein. (119 aa)
	C3XRW6_BRAFL	Receptor protein-tyrosine kinase. (609 aa)
	C3XSA3_BRAFL	Uncharacterized protein. (213 aa)
	C3XST3_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (406 aa)
	C3XT85_BRAFL	Uncharacterized protein. (78 aa)
	C3XTH3_BRAFL	Uncharacterized protein. (217 aa)
	C3XVV5_BRAFL	VKc domain-containing protein. (170 aa)
	C3XW39_BRAFL	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (163 aa)
	C3XWH6_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (386 aa)
	C3XYJ0_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (344 aa)
	C3XYZ3_BRAFL	MADS-box domain-containing protein. (534 aa)
	C3XZR5_BRAFL	Uncharacterized protein. (1934 aa)
	C3XZV2_BRAFL	Uncharacterized protein. (502 aa)
	C3Y043_BRAFL	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (196 aa)
	C3Y045_BRAFL	Uncharacterized protein. (223 aa)
	C3Y2H2_BRAFL	Uncharacterized protein. (258 aa)
	C3Y3G8_BRAFL	Uncharacterized protein. (1177 aa)
	C3Y3S6_BRAFL	Uncharacterized protein. (1792 aa)
	C3Y4W2_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (534 aa)
	C3Y5C7_BRAFL	Uncharacterized protein. (358 aa)
	C3Y5V4_BRAFL	Uncharacterized protein. (686 aa)
	C3Y7I1_BRAFL	Kringle domain-containing protein. (186 aa)
	C3Y7R4_BRAFL	Kringle domain-containing protein. (98 aa)
	C3Y923_BRAFL	Uncharacterized protein. (398 aa)
	C3YBC3_BRAFL	Uncharacterized protein. (2153 aa)
	C3YBC4_BRAFL	Uncharacterized protein. (7064 aa)
	C3YBC6_BRAFL	Uncharacterized protein. (118 aa)
	C3YDF9_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (378 aa)
	C3YDG0_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (410 aa)
	C3YDN0_BRAFL	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis. (125 aa)
	C3YEW7_BRAFL	Uncharacterized protein. (460 aa)
	C3YGR7_BRAFL	Ig-like domain-containing protein. (401 aa)
	C3YH34_BRAFL	Uncharacterized protein. (563 aa)
	C3YIV6_BRAFL	Uncharacterized protein. (222 aa)
	C3YKX9_BRAFL	Uncharacterized protein. (564 aa)
	C3YLC6_BRAFL	Uncharacterized protein. (186 aa)
	C3YM73_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (419 aa)
	C3YMH1_BRAFL	Uncharacterized protein. (269 aa)
	C3YMW6_BRAFL	Uncharacterized protein. (1065 aa)
	C3YN33_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (348 aa)
	C3YP16_BRAFL	Uncharacterized protein. (460 aa)
	C3YP17_BRAFL	Uncharacterized protein. (586 aa)
	C3YT64_BRAFL	Protein kinase domain-containing protein. (149 aa)
	C3YVC3_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (407 aa)
	C3YVD9_BRAFL	Ig-like domain-containing protein. (407 aa)
	C3Z2B8_BRAFL	Uncharacterized protein. (836 aa)
	C3Z378_BRAFL	Metallophos domain-containing protein. (430 aa)
	C3Z388_BRAFL	Metallophos domain-containing protein. (425 aa)
	C3Z4C6_BRAFL	F5/8 type C domain-containing protein. (232 aa)
	C3Z4C9_BRAFL	Kringle domain-containing protein. (77 aa)
	C3Z564_BRAFL	Uncharacterized protein. (487 aa)
	C3Z5A6_BRAFL	Uncharacterized protein; Belongs to the peptidase S1 family. (429 aa)
	C3Z5V6_BRAFL	Uncharacterized protein. (464 aa)
	C3Z5V7_BRAFL	Uncharacterized protein. (486 aa)
	C3Z6E4_BRAFL	Uncharacterized protein. (1203 aa)
	C3Z6K0_BRAFL	Uncharacterized protein. (269 aa)
	C3Z6M6_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (364 aa)
	C3Z8X9_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (360 aa)
	C3ZB28_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (371 aa)
	C3ZCG9_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (383 aa)
	C3ZEB7_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (280 aa)
	C3ZF76_BRAFL	Uncharacterized protein. (903 aa)
	C3ZNM6_BRAFL	Kringle domain-containing protein. (92 aa)
	C3ZFK8_BRAFL	Uncharacterized protein. (106 aa)
	C3ZFM6_BRAFL	Kringle domain-containing protein. (80 aa)
	C3ZJA0_BRAFL	Ig-like domain-containing protein. (302 aa)
	C3ZJA1_BRAFL	Ig-like domain-containing protein. (390 aa)
	C3ZJA2_BRAFL	Ig-like domain-containing protein. (383 aa)
	C3ZK71_BRAFL	Uncharacterized protein. (360 aa)
	C3ZK76_BRAFL	RING-type domain-containing protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (2133 aa)
	C3ZLB7_BRAFL	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (250 aa)
	C3ZQ58_BRAFL	LRRCT domain-containing protein. (378 aa)
	C3ZQ63_BRAFL	Uncharacterized protein. (538 aa)
	C3ZQP5_BRAFL	Disintegrin domain-containing protein. (277 aa)
	C3ZQP6_BRAFL	Peptidase M12B domain-containing protein. (99 aa)
	C3ZR04_BRAFL	Uncharacterized protein. (454 aa)
	C3ZRS7_BRAFL	Uncharacterized protein. (159 aa)
	C3ZRV0_BRAFL	F5/8 type C domain-containing protein. (902 aa)
	C3ZS42_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (405 aa)
	C3ZSX4_BRAFL	Uncharacterized protein. (306 aa)
	C3ZSX9_BRAFL	F5/8 type C domain-containing protein. (199 aa)
	C3ZV73_BRAFL	VKc domain-containing protein. (153 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)
	C3ZW47_BRAFL	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (255 aa)
	C3ZWZ8_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (181 aa)
	C3ZXB4_BRAFL	Uncharacterized protein. (234 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRW5_BRAFL	C3XRW6_BRAFL	C3XRW5	C3XRW6	Protein kinase domain-containing protein.	Receptor protein-tyrosine kinase.	0.870
C3XRW5_BRAFL	C3YEW7_BRAFL	C3XRW5	C3YEW7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.951
C3XRW5_BRAFL	C3YKX9_BRAFL	C3XRW5	C3YKX9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.746
C3XRW6_BRAFL	C3XRW5_BRAFL	C3XRW6	C3XRW5	Receptor protein-tyrosine kinase.	Protein kinase domain-containing protein.	0.870
C3XRW6_BRAFL	C3YEW7_BRAFL	C3XRW6	C3YEW7	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.951
C3XRW6_BRAFL	C3YKX9_BRAFL	C3XRW6	C3YKX9	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.746
C3XSA3_BRAFL	C3YP16_BRAFL	C3XSA3	C3YP16	Uncharacterized protein.	Uncharacterized protein.	0.509
C3XSA3_BRAFL	C3YT64_BRAFL	C3XSA3	C3YT64	Uncharacterized protein.	Protein kinase domain-containing protein.	0.460
C3XTH3_BRAFL	C3YIV6_BRAFL	C3XTH3	C3YIV6	Uncharacterized protein.	Uncharacterized protein.	0.904
C3XVV5_BRAFL	C3ZV73_BRAFL	C3XVV5	C3ZV73	VKc domain-containing protein.	VKc domain-containing protein.	0.903
C3Y043_BRAFL	C3YT64_BRAFL	C3Y043	C3YT64	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Protein kinase domain-containing protein.	0.615
C3Y5V4_BRAFL	C3YDN0_BRAFL	C3Y5V4	C3YDN0	Uncharacterized protein.	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.	0.650
C3Y5V4_BRAFL	C3Z2B8_BRAFL	C3Y5V4	C3Z2B8	Uncharacterized protein.	Uncharacterized protein.	0.762
C3Y5V4_BRAFL	C3Z6E4_BRAFL	C3Y5V4	C3Z6E4	Uncharacterized protein.	Uncharacterized protein.	0.969
C3Y5V4_BRAFL	C3ZRS7_BRAFL	C3Y5V4	C3ZRS7	Uncharacterized protein.	Uncharacterized protein.	0.572
C3Y5V4_BRAFL	C3ZXB4_BRAFL	C3Y5V4	C3ZXB4	Uncharacterized protein.	Uncharacterized protein.	0.576
C3Y5V4_BRAFL	C4A096_BRAFL	C3Y5V4	C4A096	Uncharacterized protein.	Uncharacterized protein.	0.576
C3YDN0_BRAFL	C3Y5V4_BRAFL	C3YDN0	C3Y5V4	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.	Uncharacterized protein.	0.650
C3YDN0_BRAFL	C3Z2B8_BRAFL	C3YDN0	C3Z2B8	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.	Uncharacterized protein.	0.793
C3YDN0_BRAFL	C3Z6E4_BRAFL	C3YDN0	C3Z6E4	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.	Uncharacterized protein.	0.762