(15 nodes) Lipoprotein catabolic process network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3XTL0_BRAFL	Uncharacterized protein. (417 aa)
	C3XTL1_BRAFL	Uncharacterized protein. (473 aa)
	C3Y285_BRAFL	Uncharacterized protein. (135 aa)
	C3YBM1_BRAFL	Abhydrolase_2 domain-containing protein. (187 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YKB1_BRAFL	Uncharacterized protein. (366 aa)
	C3YKB2_BRAFL	Uncharacterized protein. (543 aa)
	C3YKK6_BRAFL	Abhydrolase_2 domain-containing protein. (135 aa)
	C3YWF1_BRAFL	Uncharacterized protein. (487 aa)
	C3ZCW0_BRAFL	Uncharacterized protein. (298 aa)
	C3ZHM6_BRAFL	Uncharacterized protein. (543 aa)
	C3ZJ72_BRAFL	AB hydrolase-1 domain-containing protein. (299 aa)
	C3ZJ94_BRAFL	Uncharacterized protein. (200 aa)
	C3ZME8_BRAFL	Uncharacterized protein. (427 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTL1_BRAFL	C3YKB1_BRAFL	C3XTL1	C3YKB1	Uncharacterized protein.	Uncharacterized protein.	0.911
C3Y285_BRAFL	C3YBM1_BRAFL	C3Y285	C3YBM1	Uncharacterized protein.	Abhydrolase_2 domain-containing protein.	0.657
C3Y285_BRAFL	C3YKK6_BRAFL	C3Y285	C3YKK6	Uncharacterized protein.	Abhydrolase_2 domain-containing protein.	0.728
C3YBM1_BRAFL	C3Y285_BRAFL	C3YBM1	C3Y285	Abhydrolase_2 domain-containing protein.	Uncharacterized protein.	0.657
C3YBM1_BRAFL	C3ZCW0_BRAFL	C3YBM1	C3ZCW0	Abhydrolase_2 domain-containing protein.	Uncharacterized protein.	0.414
C3YH71_BRAFL	C3YH73_BRAFL	C3YH71	C3YH73	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.948
C3YH73_BRAFL	C3YH71_BRAFL	C3YH73	C3YH71	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.948
C3YKB1_BRAFL	C3XTL1_BRAFL	C3YKB1	C3XTL1	Uncharacterized protein.	Uncharacterized protein.	0.911
C3YKK6_BRAFL	C3Y285_BRAFL	C3YKK6	C3Y285	Abhydrolase_2 domain-containing protein.	Uncharacterized protein.	0.728
C3ZCW0_BRAFL	C3YBM1_BRAFL	C3ZCW0	C3YBM1	Uncharacterized protein.	Abhydrolase_2 domain-containing protein.	0.414