(18 nodes) Water-soluble vitamin biosynthetic process network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XWH5_BRAFL	Amine oxidase. (542 aa)
	C3ZTS2_BRAFL	Uncharacterized protein. (461 aa)
	C3ZI45_BRAFL	FAD-binding PCMH-type domain-containing protein. (462 aa)
	C3Z9R4_BRAFL	Uncharacterized protein. (467 aa)
	C3Z9Q8_BRAFL	Amine oxidase. (527 aa)
	C3YVK9_BRAFL	FolB domain-containing protein. (311 aa)
	C3XTA9_BRAFL	TPK_B1_binding domain-containing protein. (222 aa)
	C3XWC8_BRAFL	Uncharacterized protein. (225 aa)
	C3XWC9_BRAFL	SGL domain-containing protein. (289 aa)
	Hip1	SGL domain-containing protein. (304 aa)
	C3XWD1_BRAFL	SGL domain-containing protein. (297 aa)
	C3ZWA7_BRAFL	Phos_pyr_kin domain-containing protein. (293 aa)
	C3XWV6_BRAFL	FolB domain-containing protein. (298 aa)
	C3YBZ9_BRAFL	Uncharacterized protein. (267 aa)
	C3YI46_BRAFL	Amine oxidase. (1121 aa)
	C3YNE3_BRAFL	SGL domain-containing protein. (286 aa)
	C3YNL5_BRAFL	FAD-binding PCMH-type domain-containing protein. (415 aa)
	C3YSY8_BRAFL	FolB domain-containing protein. (1284 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XWC9_BRAFL	C3ZI45_BRAFL	C3XWC9	C3ZI45	SGL domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.927
C3XWC9_BRAFL	Hip1	C3XWC9	C3XWD0	SGL domain-containing protein.	SGL domain-containing protein.	0.901
C3XWH5_BRAFL	C3Z9Q8_BRAFL	C3XWH5	C3Z9Q8	Amine oxidase.	Amine oxidase.	0.905
C3XWH5_BRAFL	C3Z9R4_BRAFL	C3XWH5	C3Z9R4	Amine oxidase.	Uncharacterized protein.	0.906
C3YBZ9_BRAFL	C3ZWA7_BRAFL	C3YBZ9	C3ZWA7	Uncharacterized protein.	Phos_pyr_kin domain-containing protein.	0.963
C3Z9Q8_BRAFL	C3XWH5_BRAFL	C3Z9Q8	C3XWH5	Amine oxidase.	Amine oxidase.	0.905
C3Z9Q8_BRAFL	C3Z9R4_BRAFL	C3Z9Q8	C3Z9R4	Amine oxidase.	Uncharacterized protein.	0.901
C3Z9R4_BRAFL	C3XWH5_BRAFL	C3Z9R4	C3XWH5	Uncharacterized protein.	Amine oxidase.	0.906
C3Z9R4_BRAFL	C3Z9Q8_BRAFL	C3Z9R4	C3Z9Q8	Uncharacterized protein.	Amine oxidase.	0.901
C3ZI45_BRAFL	C3XWC9_BRAFL	C3ZI45	C3XWC9	FAD-binding PCMH-type domain-containing protein.	SGL domain-containing protein.	0.927
C3ZI45_BRAFL	Hip1	C3ZI45	C3XWD0	FAD-binding PCMH-type domain-containing protein.	SGL domain-containing protein.	0.927
C3ZWA7_BRAFL	C3YBZ9_BRAFL	C3ZWA7	C3YBZ9	Phos_pyr_kin domain-containing protein.	Uncharacterized protein.	0.963
Hip1	C3XWC9_BRAFL	C3XWD0	C3XWC9	SGL domain-containing protein.	SGL domain-containing protein.	0.901
Hip1	C3ZI45_BRAFL	C3XWD0	C3ZI45	SGL domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.927