(38 nodes) Apical junction complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZKL9_BRAFL	FERM domain-containing protein. (552 aa)
	C3ZMF0_BRAFL	Uncharacterized protein. (241 aa)
	C3ZML1_BRAFL	Uncharacterized protein. (69 aa)
	C3ZT37_BRAFL	Uncharacterized protein. (858 aa)
	C3ZZV6_BRAFL	Uncharacterized protein. (183 aa)
	C3Z2K3_BRAFL	PDZ domain-containing protein. (64 aa)
	C3XRJ2_BRAFL	SH3 domain-containing protein. (371 aa)
	C3XRZ4_BRAFL	Uncharacterized protein. (4810 aa)
	C3XTZ3_BRAFL	Uncharacterized protein. (1073 aa)
	C3Y0J3_BRAFL	Uncharacterized protein; Belongs to the MAGUK family. (635 aa)
	C3Y0K2_BRAFL	Uncharacterized protein. (881 aa)
	C3Y134_BRAFL	BRO1 domain-containing protein. (874 aa)
	C3Y2J2_BRAFL	Uncharacterized protein. (2623 aa)
	C3Y8Z8_BRAFL	Uncharacterized protein. (396 aa)
	C3YC89_BRAFL	Uncharacterized protein. (734 aa)
	C3YC92_BRAFL	Uncharacterized protein. (440 aa)
	C3YJI7_BRAFL	Uncharacterized protein. (923 aa)
	C3YKF2_BRAFL	Uncharacterized protein; Belongs to the MAGUK family. (1549 aa)
	C3YMD2_BRAFL	Uncharacterized protein. (151 aa)
	C3YNJ8_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (413 aa)
	C3YNK4_BRAFL	Uncharacterized protein. (210 aa)
	C3YPA0_BRAFL	PDZ domain-containing protein. (91 aa)
	C3YTC1_BRAFL	Uncharacterized protein. (654 aa)
	C3YTC2_BRAFL	Uncharacterized protein. (219 aa)
	C3YZ65_BRAFL	Uncharacterized protein; Belongs to the tumor necrosis factor family. (565 aa)
	C3YZ92_BRAFL	ASD2 domain-containing protein. (1429 aa)
	C3Z2K2_BRAFL	Uncharacterized protein. (534 aa)
	C3Z2K4_BRAFL	Uncharacterized protein. (400 aa)
	C3Z2X5_BRAFL	FERM domain-containing protein. (316 aa)
	C3Z2X7_BRAFL	Uncharacterized protein. (708 aa)
	C3Z3T9_BRAFL	Uncharacterized protein. (187 aa)
	C3Z4J2_BRAFL	Uncharacterized protein. (384 aa)
	C3ZBZ7_BRAFL	Uncharacterized protein. (273 aa)
	C3ZEW4_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (385 aa)
	C3ZEY5_BRAFL	FERM domain-containing protein. (1311 aa)
	C3ZG76_BRAFL	PDZ domain-containing protein. (917 aa)
	C3ZHY9_BRAFL	Uncharacterized protein. (537 aa)
	C3ZKL8_BRAFL	FERM domain-containing protein. (345 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRJ2_BRAFL	C3Y0J3_BRAFL	C3XRJ2	C3Y0J3	SH3 domain-containing protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.402
C3XTZ3_BRAFL	C3YKF2_BRAFL	C3XTZ3	C3YKF2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.603
C3XTZ3_BRAFL	C3ZT37_BRAFL	C3XTZ3	C3ZT37	Uncharacterized protein.	Uncharacterized protein.	0.883
C3Y0J3_BRAFL	C3XRJ2_BRAFL	C3Y0J3	C3XRJ2	Uncharacterized protein; Belongs to the MAGUK family.	SH3 domain-containing protein.	0.402
C3Y0J3_BRAFL	C3Y2J2_BRAFL	C3Y0J3	C3Y2J2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.751
C3Y0J3_BRAFL	C3YMD2_BRAFL	C3Y0J3	C3YMD2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.751
C3Y0J3_BRAFL	C3YNK4_BRAFL	C3Y0J3	C3YNK4	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.530
C3Y0J3_BRAFL	C3YTC1_BRAFL	C3Y0J3	C3YTC1	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.729
C3Y0J3_BRAFL	C3YTC2_BRAFL	C3Y0J3	C3YTC2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.729
C3Y0J3_BRAFL	C3YZ65_BRAFL	C3Y0J3	C3YZ65	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the tumor necrosis factor family.	0.751
C3Y0J3_BRAFL	C3ZBZ7_BRAFL	C3Y0J3	C3ZBZ7	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.538
C3Y0J3_BRAFL	C3ZEY5_BRAFL	C3Y0J3	C3ZEY5	Uncharacterized protein; Belongs to the MAGUK family.	FERM domain-containing protein.	0.676
C3Y0J3_BRAFL	C3ZT37_BRAFL	C3Y0J3	C3ZT37	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.405
C3Y2J2_BRAFL	C3Y0J3_BRAFL	C3Y2J2	C3Y0J3	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.751
C3Y8Z8_BRAFL	C3Z2X5_BRAFL	C3Y8Z8	C3Z2X5	Uncharacterized protein.	FERM domain-containing protein.	0.522
C3Y8Z8_BRAFL	C3Z2X7_BRAFL	C3Y8Z8	C3Z2X7	Uncharacterized protein.	Uncharacterized protein.	0.522
C3YC89_BRAFL	C3YC92_BRAFL	C3YC89	C3YC92	Uncharacterized protein.	Uncharacterized protein.	0.932
C3YC92_BRAFL	C3YC89_BRAFL	C3YC92	C3YC89	Uncharacterized protein.	Uncharacterized protein.	0.932
C3YKF2_BRAFL	C3XTZ3_BRAFL	C3YKF2	C3XTZ3	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.603
C3YKF2_BRAFL	C3Z4J2_BRAFL	C3YKF2	C3Z4J2	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.962