(46 nodes) Transmembrane transporter binding network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPY8_BRAFL	Uncharacterized protein. (1177 aa)
	C3XPE8_BRAFL	Peptidase M60 domain-containing protein. (676 aa)
	C3XQ85_BRAFL	Aldo_ket_red domain-containing protein. (346 aa)
	C3XRC9_BRAFL	Uncharacterized protein. (948 aa)
	C3XXQ9_BRAFL	Uncharacterized protein. (809 aa)
	C3XY93_BRAFL	Peptidase M60 domain-containing protein. (533 aa)
	C3XZ42_BRAFL	Uncharacterized protein. (893 aa)
	C3Y0G3_BRAFL	ANK_REP_REGION domain-containing protein. (150 aa)
	C3YDJ2_BRAFL	Uncharacterized protein. (1349 aa)
	C3YET7_BRAFL	ANK_REP_REGION domain-containing protein. (294 aa)
	C3YET8_BRAFL	ANK_REP_REGION domain-containing protein. (123 aa)
	C3YH13_BRAFL	KASH domain-containing protein. (2704 aa)
	C3YIN3_BRAFL	ANK_REP_REGION domain-containing protein. (165 aa)
	C3YPS6_BRAFL	LRRNT domain-containing protein. (166 aa)
	C3YTP4_BRAFL	Uncharacterized protein. (112 aa)
	C3YUU7_BRAFL	KCNQ_channel domain-containing protein. (66 aa)
	C3YUU8_BRAFL	Ion_trans_2 domain-containing protein. (111 aa)
	C3YUU9_BRAFL	Ion_trans domain-containing protein; Belongs to the potassium channel family. (157 aa)
	C3YVA8_BRAFL	Uncharacterized protein. (477 aa)
	C3Z0H4_BRAFL	Uncharacterized protein. (482 aa)
	C3Z126_BRAFL	Ubiquitin carboxyl-terminal hydrolase. (402 aa)
	C3Z628_BRAFL	Uncharacterized protein. (937 aa)
	C3Z792_BRAFL	Uncharacterized protein. (4526 aa)
	C3Z7N6_BRAFL	Uncharacterized protein. (223 aa)
	C3Z851_BRAFL	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (135 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZB59_BRAFL	Uncharacterized protein. (148 aa)
	C3ZB87_BRAFL	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (138 aa)
	C3ZB88_BRAFL	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (138 aa)
	C3ZBY6_BRAFL	Uncharacterized protein. (229 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3ZJV5_BRAFL	Uncharacterized protein. (473 aa)
	C3ZNT3_BRAFL	PDZ domain-containing protein. (660 aa)
	C3ZQ44_BRAFL	Uncharacterized protein. (144 aa)
	C3ZQ45_BRAFL	Uncharacterized protein. (160 aa)
	C3ZQ72_BRAFL	Uncharacterized protein. (173 aa)
	C3ZQN1_BRAFL	FYVE-type domain-containing protein. (561 aa)
	C3ZQN2_BRAFL	PDZ domain-containing protein. (118 aa)
	C3ZQN3_BRAFL	C2 domain-containing protein. (116 aa)
	C3ZRF8_BRAFL	ANK_REP_REGION domain-containing protein. (501 aa)
	C3ZZJ0_BRAFL	Uncharacterized protein. (176 aa)
	C4A0A7_BRAFL	Uncharacterized protein. (177 aa)
	C4A101_BRAFL	Uncharacterized protein. (476 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQ85_BRAFL	C3YUU7_BRAFL	C3XQ85	C3YUU7	Aldo_ket_red domain-containing protein.	KCNQ_channel domain-containing protein.	0.451
C3XQ85_BRAFL	C3YUU8_BRAFL	C3XQ85	C3YUU8	Aldo_ket_red domain-containing protein.	Ion_trans_2 domain-containing protein.	0.451
C3XQ85_BRAFL	C3YUU9_BRAFL	C3XQ85	C3YUU9	Aldo_ket_red domain-containing protein.	Ion_trans domain-containing protein; Belongs to the potassium channel family.	0.451
C3YET8_BRAFL	C3ZJV5_BRAFL	C3YET8	C3ZJV5	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.422
C3YET8_BRAFL	C4A101_BRAFL	C3YET8	C4A101	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.439
C3YUU7_BRAFL	C3XQ85_BRAFL	C3YUU7	C3XQ85	KCNQ_channel domain-containing protein.	Aldo_ket_red domain-containing protein.	0.451
C3YUU8_BRAFL	C3XQ85_BRAFL	C3YUU8	C3XQ85	Ion_trans_2 domain-containing protein.	Aldo_ket_red domain-containing protein.	0.451
C3YUU8_BRAFL	C3YUU9_BRAFL	C3YUU8	C3YUU9	Ion_trans_2 domain-containing protein.	Ion_trans domain-containing protein; Belongs to the potassium channel family.	0.473
C3YUU9_BRAFL	C3XQ85_BRAFL	C3YUU9	C3XQ85	Ion_trans domain-containing protein; Belongs to the potassium channel family.	Aldo_ket_red domain-containing protein.	0.451
C3YUU9_BRAFL	C3YUU8_BRAFL	C3YUU9	C3YUU8	Ion_trans domain-containing protein; Belongs to the potassium channel family.	Ion_trans_2 domain-containing protein.	0.473
C3Z0H4_BRAFL	C3ZQN1_BRAFL	C3Z0H4	C3ZQN1	Uncharacterized protein.	FYVE-type domain-containing protein.	0.466
C3Z0H4_BRAFL	C3ZQN2_BRAFL	C3Z0H4	C3ZQN2	Uncharacterized protein.	PDZ domain-containing protein.	0.605
C3Z0H4_BRAFL	C3ZQN3_BRAFL	C3Z0H4	C3ZQN3	Uncharacterized protein.	C2 domain-containing protein.	0.605
C3Z851_BRAFL	C3ZB87_BRAFL	C3Z851	C3ZB87	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.904
C3Z851_BRAFL	C3ZB88_BRAFL	C3Z851	C3ZB88	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.904
C3ZB87_BRAFL	C3Z851_BRAFL	C3ZB87	C3Z851	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.904
C3ZB87_BRAFL	C3ZB88_BRAFL	C3ZB87	C3ZB88	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.900
C3ZB88_BRAFL	C3Z851_BRAFL	C3ZB88	C3Z851	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.904
C3ZB88_BRAFL	C3ZB87_BRAFL	C3ZB88	C3ZB87	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.900
C3ZGJ8_BRAFL	C3ZGJ9_BRAFL	C3ZGJ8	C3ZGJ9	Uncharacterized protein.	Uncharacterized protein.	0.943