STRINGSTRING
C3XRN1_BRAFL C3XRN1_BRAFL C3XVK2_BRAFL C3XVK2_BRAFL C3XW52_BRAFL C3XW52_BRAFL C3Y276_BRAFL C3Y276_BRAFL C3Y9K8_BRAFL C3Y9K8_BRAFL C3YD03_BRAFL C3YD03_BRAFL C3YEI7_BRAFL C3YEI7_BRAFL C3YF46_BRAFL C3YF46_BRAFL C4A0W8_BRAFL C4A0W8_BRAFL C3ZWS9_BRAFL C3ZWS9_BRAFL C3ZNA6_BRAFL C3ZNA6_BRAFL C3ZGU5_BRAFL C3ZGU5_BRAFL C3ZGQ4_BRAFL C3ZGQ4_BRAFL C3ZE86_BRAFL C3ZE86_BRAFL C3ZCS2_BRAFL C3ZCS2_BRAFL C3Z937_BRAFL C3Z937_BRAFL C3Z2T5_BRAFL C3Z2T5_BRAFL C3YYC7_BRAFL C3YYC7_BRAFL C3YW57_BRAFL C3YW57_BRAFL C3YW52_BRAFL C3YW52_BRAFL C3YQ66_BRAFL C3YQ66_BRAFL C3YIR6_BRAFL C3YIR6_BRAFL C3YIC9_BRAFL C3YIC9_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XRN1_BRAFLUncharacterized protein. (1244 aa)
C3XVK2_BRAFLGOLD domain-containing protein. (203 aa)
C3XW52_BRAFLUncharacterized protein. (734 aa)
C3Y276_BRAFLUncharacterized protein. (902 aa)
C3Y9K8_BRAFLANK_REP_REGION domain-containing protein. (133 aa)
C3YD03_BRAFLUncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa)
C3YEI7_BRAFLUncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)
C3YF46_BRAFLUncharacterized protein. (420 aa)
C4A0W8_BRAFLMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
C3ZWS9_BRAFLEGF-like domain-containing protein. (710 aa)
C3ZNA6_BRAFLUncharacterized protein. (294 aa)
C3ZGU5_BRAFLUncharacterized protein. (317 aa)
C3ZGQ4_BRAFLCu2_monoox_C domain-containing protein. (435 aa)
C3ZE86_BRAFLG_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (290 aa)
C3ZCS2_BRAFLPITH domain-containing protein. (206 aa)
C3Z937_BRAFLUncharacterized protein. (111 aa)
C3Z2T5_BRAFLUncharacterized protein. (454 aa)
C3YYC7_BRAFLG_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (303 aa)
C3YW57_BRAFLMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
C3YW52_BRAFLDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1140 aa)
C3YQ66_BRAFLUncharacterized protein. (520 aa)
C3YIR6_BRAFLUncharacterized protein. (113 aa)
C3YIC9_BRAFLUncharacterized protein. (748 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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