(8 nodes) Autolysosome network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C4A0I4_BRAFL	Battenin. (336 aa)
	C3XXF8_BRAFL	Uncharacterized protein. (554 aa)
	C3Y1V6_BRAFL	Phosphatidylinositol 3-kinase catalytic subunit type 3. (890 aa)
	C3YNA7_BRAFL	Battenin. (404 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZEI0_BRAFL	Uncharacterized protein. (246 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XXF8_BRAFL	C3Y1V6_BRAFL	C3XXF8	C3Y1V6	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.476
C3XXF8_BRAFL	C3ZEI0_BRAFL	C3XXF8	C3ZEI0	Uncharacterized protein.	Uncharacterized protein.	0.533
C3Y1V6_BRAFL	C3XXF8_BRAFL	C3Y1V6	C3XXF8	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Uncharacterized protein.	0.476
C3Y1V6_BRAFL	C3ZEI0_BRAFL	C3Y1V6	C3ZEI0	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Uncharacterized protein.	0.424
C3ZEI0_BRAFL	C3XXF8_BRAFL	C3ZEI0	C3XXF8	Uncharacterized protein.	Uncharacterized protein.	0.533
C3ZEI0_BRAFL	C3Y1V6_BRAFL	C3ZEI0	C3Y1V6	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.424