(46 nodes) Meiotic chromosome segregation network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YT48_BRAFL	Structural maintenance of chromosomes protein. (1229 aa)
	C3XPH5_BRAFL	Uncharacterized protein. (501 aa)
	C3XPU5_BRAFL	ERCC4 domain-containing protein. (1825 aa)
	C3XR93_BRAFL	DNA_mis_repair domain-containing protein. (362 aa)
	C3XRP0_BRAFL	Uncharacterized protein. (2342 aa)
	C3XSQ6_BRAFL	Uncharacterized protein. (196 aa)
	C3XV32_BRAFL	Uncharacterized protein. (457 aa)
	C3XYZ5_BRAFL	Protein kinase domain-containing protein. (211 aa)
	C3XYZ6_BRAFL	BUB1 N-terminal domain-containing protein. (234 aa)
	C3Y0V4_BRAFL	ERCC4 domain-containing protein. (268 aa)
	C3Y0V8_BRAFL	ERCC4 domain-containing protein. (600 aa)
	C3Y0V9_BRAFL	Uncharacterized protein. (343 aa)
	C3Y120_BRAFL	Uncharacterized protein. (82 aa)
	C3Y458_BRAFL	DNA_mis_repair domain-containing protein. (717 aa)
	C3Y6J8_BRAFL	Uncharacterized protein. (156 aa)
	C3Y7J4_BRAFL	HORMA domain-containing protein. (202 aa)
	C3Y7Y2_BRAFL	Peptidase C50 domain-containing protein. (2958 aa)
	C3Y909_BRAFL	Deacetylase sirtuin-type domain-containing protein. (399 aa)
	C3YA66_BRAFL	Uncharacterized protein. (348 aa)
	C3YAZ8_BRAFL	SEC63 domain-containing protein. (466 aa)
	C3YFI7_BRAFL	AAA domain-containing protein; Belongs to the AAA ATPase family. (409 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YI31_BRAFL	DUF1767 domain-containing protein. (184 aa)
	C3YI56_BRAFL	Uncharacterized protein. (162 aa)
	C3YI58_BRAFL	TPR_REGION domain-containing protein. (720 aa)
	C3YK10_BRAFL	SMC hinge domain-containing protein. (1155 aa)
	C3YNI7_BRAFL	Uncharacterized protein. (1175 aa)
	C3YQ02_BRAFL	LEM domain-containing protein. (1888 aa)
	C3YQP1_BRAFL	MutS_IV domain-containing protein. (210 aa)
	C3YQP3_BRAFL	Uncharacterized protein. (215 aa)
	C3YV52_BRAFL	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (205 aa)
	C3YX60_BRAFL	Uncharacterized protein. (358 aa)
	C3YYJ6_BRAFL	TOP4c domain-containing protein. (1181 aa)
	C3Z1V1_BRAFL	DNA_MISMATCH_REPAIR_2 domain-containing protein. (774 aa)
	C3Z6W7_BRAFL	ERCC4 domain-containing protein. (598 aa)
	C3Z9G3_BRAFL	Ubiquitin-like domain-containing protein. (1268 aa)
	C3ZBU1_BRAFL	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (412 aa)
	C3ZHE3_BRAFL	Uncharacterized protein. (212 aa)
	C3ZJ92_BRAFL	Uncharacterized protein. (185 aa)
	C3ZNW9_BRAFL	ERCC4 domain-containing protein. (515 aa)
	C3ZNX8_BRAFL	Uncharacterized protein. (233 aa)
	C3ZR70_BRAFL	Uncharacterized protein. (379 aa)
	C3ZRQ6_BRAFL	RING-type domain-containing protein. (178 aa)
	C3ZTM6_BRAFL	SWIM-type domain-containing protein. (1257 aa)
	C4A088_BRAFL	BTB domain-containing protein. (2428 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPU5_BRAFL	C3XRP0_BRAFL	C3XPU5	C3XRP0	ERCC4 domain-containing protein.	Uncharacterized protein.	0.964
C3XPU5_BRAFL	C3Y0V4_BRAFL	C3XPU5	C3Y0V4	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.540
C3XPU5_BRAFL	C3Y0V8_BRAFL	C3XPU5	C3Y0V8	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.540
C3XPU5_BRAFL	C3Y0V9_BRAFL	C3XPU5	C3Y0V9	ERCC4 domain-containing protein.	Uncharacterized protein.	0.540
C3XPU5_BRAFL	C3YH71_BRAFL	C3XPU5	C3YH71	ERCC4 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.402
C3XPU5_BRAFL	C3YH73_BRAFL	C3XPU5	C3YH73	ERCC4 domain-containing protein.	FAT domain-containing protein.	0.402
C3XPU5_BRAFL	C3YI31_BRAFL	C3XPU5	C3YI31	ERCC4 domain-containing protein.	DUF1767 domain-containing protein.	0.661
C3XPU5_BRAFL	C3YNI7_BRAFL	C3XPU5	C3YNI7	ERCC4 domain-containing protein.	Uncharacterized protein.	0.509
C3XPU5_BRAFL	C3Z6W7_BRAFL	C3XPU5	C3Z6W7	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.960
C3XPU5_BRAFL	C3ZNW9_BRAFL	C3XPU5	C3ZNW9	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.613
C3XPU5_BRAFL	C3ZNX8_BRAFL	C3XPU5	C3ZNX8	ERCC4 domain-containing protein.	Uncharacterized protein.	0.613
C3XPU5_BRAFL	C4A088_BRAFL	C3XPU5	C4A088	ERCC4 domain-containing protein.	BTB domain-containing protein.	0.586
C3XR93_BRAFL	C3XRP0_BRAFL	C3XR93	C3XRP0	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.647
C3XR93_BRAFL	C3Y458_BRAFL	C3XR93	C3Y458	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.997
C3XR93_BRAFL	C3Y7J4_BRAFL	C3XR93	C3Y7J4	DNA_mis_repair domain-containing protein.	HORMA domain-containing protein.	0.497
C3XR93_BRAFL	C3YAZ8_BRAFL	C3XR93	C3YAZ8	DNA_mis_repair domain-containing protein.	SEC63 domain-containing protein.	0.604
C3XR93_BRAFL	C3YH71_BRAFL	C3XR93	C3YH71	DNA_mis_repair domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.491
C3XR93_BRAFL	C3YH73_BRAFL	C3XR93	C3YH73	DNA_mis_repair domain-containing protein.	FAT domain-containing protein.	0.491
C3XR93_BRAFL	C3YQP1_BRAFL	C3XR93	C3YQP1	DNA_mis_repair domain-containing protein.	MutS_IV domain-containing protein.	0.830
C3XR93_BRAFL	C3YQP3_BRAFL	C3XR93	C3YQP3	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.830