(26 nodes) Homologous chromosome segregation network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YFI7_BRAFL	AAA domain-containing protein; Belongs to the AAA ATPase family. (409 aa)
	C3XPH5_BRAFL	Uncharacterized protein. (501 aa)
	C3XR93_BRAFL	DNA_mis_repair domain-containing protein. (362 aa)
	C3XSQ6_BRAFL	Uncharacterized protein. (196 aa)
	C3XV32_BRAFL	Uncharacterized protein. (457 aa)
	C3Y120_BRAFL	Uncharacterized protein. (82 aa)
	C3Y458_BRAFL	DNA_mis_repair domain-containing protein. (717 aa)
	C3Y7Y2_BRAFL	Peptidase C50 domain-containing protein. (2958 aa)
	C3Y909_BRAFL	Deacetylase sirtuin-type domain-containing protein. (399 aa)
	C3YA66_BRAFL	Uncharacterized protein. (348 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YI56_BRAFL	Uncharacterized protein. (162 aa)
	C3YI58_BRAFL	TPR_REGION domain-containing protein. (720 aa)
	C3YNI7_BRAFL	Uncharacterized protein. (1175 aa)
	C3YQP1_BRAFL	MutS_IV domain-containing protein. (210 aa)
	C3YQP3_BRAFL	Uncharacterized protein. (215 aa)
	C3YV52_BRAFL	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (205 aa)
	C3YX60_BRAFL	Uncharacterized protein. (358 aa)
	C3Z1V1_BRAFL	DNA_MISMATCH_REPAIR_2 domain-containing protein. (774 aa)
	C3Z9G3_BRAFL	Ubiquitin-like domain-containing protein. (1268 aa)
	C3ZBU1_BRAFL	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (412 aa)
	C3ZHE3_BRAFL	Uncharacterized protein. (212 aa)
	C3ZJ92_BRAFL	Uncharacterized protein. (185 aa)
	C3ZR70_BRAFL	Uncharacterized protein. (379 aa)
	C3ZRQ6_BRAFL	RING-type domain-containing protein. (178 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR93_BRAFL	C3Y458_BRAFL	C3XR93	C3Y458	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.997
C3XR93_BRAFL	C3YH71_BRAFL	C3XR93	C3YH71	DNA_mis_repair domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.491
C3XR93_BRAFL	C3YH73_BRAFL	C3XR93	C3YH73	DNA_mis_repair domain-containing protein.	FAT domain-containing protein.	0.491
C3XR93_BRAFL	C3YQP1_BRAFL	C3XR93	C3YQP1	DNA_mis_repair domain-containing protein.	MutS_IV domain-containing protein.	0.830
C3XR93_BRAFL	C3YQP3_BRAFL	C3XR93	C3YQP3	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.830
C3XR93_BRAFL	C3YV52_BRAFL	C3XR93	C3YV52	DNA_mis_repair domain-containing protein.	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	0.706
C3XR93_BRAFL	C3Z1V1_BRAFL	C3XR93	C3Z1V1	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.930
C3XR93_BRAFL	C3ZRQ6_BRAFL	C3XR93	C3ZRQ6	DNA_mis_repair domain-containing protein.	RING-type domain-containing protein.	0.529
C3XSQ6_BRAFL	C3Z1V1_BRAFL	C3XSQ6	C3Z1V1	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.481
C3Y458_BRAFL	C3XR93_BRAFL	C3Y458	C3XR93	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.997
C3Y458_BRAFL	C3YH71_BRAFL	C3Y458	C3YH71	DNA_mis_repair domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.681
C3Y458_BRAFL	C3YH73_BRAFL	C3Y458	C3YH73	DNA_mis_repair domain-containing protein.	FAT domain-containing protein.	0.681
C3Y458_BRAFL	C3YNI7_BRAFL	C3Y458	C3YNI7	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.601
C3Y458_BRAFL	C3YQP1_BRAFL	C3Y458	C3YQP1	DNA_mis_repair domain-containing protein.	MutS_IV domain-containing protein.	0.830
C3Y458_BRAFL	C3YQP3_BRAFL	C3Y458	C3YQP3	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.830
C3Y458_BRAFL	C3YV52_BRAFL	C3Y458	C3YV52	DNA_mis_repair domain-containing protein.	Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.	0.710
C3Y458_BRAFL	C3Z1V1_BRAFL	C3Y458	C3Z1V1	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.901
C3Y458_BRAFL	C3ZRQ6_BRAFL	C3Y458	C3ZRQ6	DNA_mis_repair domain-containing protein.	RING-type domain-containing protein.	0.531
C3Y7Y2_BRAFL	C3YFI7_BRAFL	C3Y7Y2	C3YFI7	Peptidase C50 domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.491
C3Y7Y2_BRAFL	C3YNI7_BRAFL	C3Y7Y2	C3YNI7	Peptidase C50 domain-containing protein.	Uncharacterized protein.	0.400