(24 nodes) Photoreceptor cell maintenance network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YUG5_BRAFL	TLC domain-containing protein. (278 aa)
	C3YGG2_BRAFL	Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (584 aa)
	C3YEG9_BRAFL	Uncharacterized protein. (425 aa)
	C3Y5J2_BRAFL	TLC domain-containing protein. (278 aa)
	C3Y3A6_BRAFL	Uncharacterized protein. (618 aa)
	C3Y2J2_BRAFL	Uncharacterized protein. (2623 aa)
	C3Y1H9_BRAFL	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (5991 aa)
	C3Y0F7_BRAFL	Uncharacterized protein. (2571 aa)
	C3Y0F6_BRAFL	Uncharacterized protein. (2807 aa)
	C3XZK6_BRAFL	Uncharacterized protein. (567 aa)
	C3XU54_BRAFL	Bardet-Biedl syndrome 2 protein homolog. (716 aa)
	C3XRE5_BRAFL	Uncharacterized protein. (569 aa)
	C3XPF9_BRAFL	Uncharacterized protein. (1346 aa)
	C3ZYE3_BRAFL	Uncharacterized protein. (475 aa)
	C3ZV71_BRAFL	Uncharacterized protein. (590 aa)
	C3Z749_BRAFL	Uncharacterized protein. (1464 aa)
	C3Z2B9_BRAFL	BBS1 domain-containing protein. (540 aa)
	C3Z217_BRAFL	PDZ domain-containing protein. (254 aa)
	C3Z216_BRAFL	Uncharacterized protein. (487 aa)
	C3YZ65_BRAFL	Uncharacterized protein; Belongs to the tumor necrosis factor family. (565 aa)
	C3YX83_BRAFL	Lebercilin domain-containing protein. (220 aa)
	C3YX78_BRAFL	Lebercilin domain-containing protein. (220 aa)
	C3YUH9_BRAFL	TLC domain-containing protein. (278 aa)
	C3YMD2_BRAFL	Uncharacterized protein. (151 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPF9_BRAFL	C3Z2B9_BRAFL	C3XPF9	C3Z2B9	Uncharacterized protein.	BBS1 domain-containing protein.	0.535
C3XPF9_BRAFL	C3ZV71_BRAFL	C3XPF9	C3ZV71	Uncharacterized protein.	Uncharacterized protein.	0.581
C3XRE5_BRAFL	C3Y3A6_BRAFL	C3XRE5	C3Y3A6	Uncharacterized protein.	Uncharacterized protein.	0.729
C3XRE5_BRAFL	C3YGG2_BRAFL	C3XRE5	C3YGG2	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.612
C3XU54_BRAFL	C3Y3A6_BRAFL	C3XU54	C3Y3A6	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.599
C3XU54_BRAFL	C3YEG9_BRAFL	C3XU54	C3YEG9	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.947
C3XU54_BRAFL	C3YGG2_BRAFL	C3XU54	C3YGG2	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.710
C3XU54_BRAFL	C3Z2B9_BRAFL	C3XU54	C3Z2B9	Bardet-Biedl syndrome 2 protein homolog.	BBS1 domain-containing protein.	0.995
C3XU54_BRAFL	C3ZYE3_BRAFL	C3XU54	C3ZYE3	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.947
C3XZK6_BRAFL	C3ZV71_BRAFL	C3XZK6	C3ZV71	Uncharacterized protein.	Uncharacterized protein.	0.447
C3Y0F6_BRAFL	C3Y1H9_BRAFL	C3Y0F6	C3Y1H9	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.493
C3Y0F7_BRAFL	C3Y1H9_BRAFL	C3Y0F7	C3Y1H9	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.619
C3Y1H9_BRAFL	C3Y0F6_BRAFL	C3Y1H9	C3Y0F6	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.493
C3Y1H9_BRAFL	C3Y0F7_BRAFL	C3Y1H9	C3Y0F7	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.619
C3Y1H9_BRAFL	C3Z216_BRAFL	C3Y1H9	C3Z216	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.478
C3Y1H9_BRAFL	C3Z217_BRAFL	C3Y1H9	C3Z217	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	PDZ domain-containing protein.	0.478
C3Y3A6_BRAFL	C3XRE5_BRAFL	C3Y3A6	C3XRE5	Uncharacterized protein.	Uncharacterized protein.	0.729
C3Y3A6_BRAFL	C3XU54_BRAFL	C3Y3A6	C3XU54	Uncharacterized protein.	Bardet-Biedl syndrome 2 protein homolog.	0.599
C3Y3A6_BRAFL	C3YEG9_BRAFL	C3Y3A6	C3YEG9	Uncharacterized protein.	Uncharacterized protein.	0.413
C3Y3A6_BRAFL	C3YGG2_BRAFL	C3Y3A6	C3YGG2	Uncharacterized protein.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.866