(78 nodes) Dynein intermediate chain binding network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZE16_BRAFL	Uncharacterized protein. (336 aa)
	C3XTI6_BRAFL	Uncharacterized protein. (105 aa)
	C3XV30_BRAFL	Uncharacterized protein. (4708 aa)
	C3XV31_BRAFL	Uncharacterized protein. (384 aa)
	C3XVH2_BRAFL	Uncharacterized protein. (99 aa)
	C3XVM4_BRAFL	Dynein light chain. (89 aa)
	C3XXR3_BRAFL	DHC_N1 domain-containing protein. (913 aa)
	C3XXR4_BRAFL	Uncharacterized protein. (1503 aa)
	C3XXR5_BRAFL	AAA_8 domain-containing protein. (442 aa)
	C3XXR6_BRAFL	Uncharacterized protein. (697 aa)
	C3XXR7_BRAFL	Uncharacterized protein. (747 aa)
	C3XXT0_BRAFL	Uncharacterized protein. (103 aa)
	C3XXX5_BRAFL	Uncharacterized protein. (254 aa)
	C3XZF8_BRAFL	AAA domain-containing protein. (2026 aa)
	C3XZF9_BRAFL	Uncharacterized protein. (2795 aa)
	C3Y1C8_BRAFL	Uncharacterized protein. (647 aa)
	C3Y600_BRAFL	Uncharacterized protein. (4244 aa)
	C3Y601_BRAFL	Dynein_C domain-containing protein. (131 aa)
	C3Y751_BRAFL	Uncharacterized protein. (170 aa)
	C3Y8Q6_BRAFL	Uncharacterized protein. (835 aa)
	C3Y8Y2_BRAFL	Dynein_C domain-containing protein. (199 aa)
	C3Y8Y3_BRAFL	Uncharacterized protein. (3769 aa)
	C3YA42_BRAFL	Uncharacterized protein. (224 aa)
	C3YA43_BRAFL	Uncharacterized protein. (217 aa)
	C3YA58_BRAFL	Uncharacterized protein. (2205 aa)
	C3YA59_BRAFL	Uncharacterized protein. (4106 aa)
	C3YAU3_BRAFL	DHC_N2 domain-containing protein. (848 aa)
	C3YAU4_BRAFL	Uncharacterized protein. (994 aa)
	C3YAU5_BRAFL	Uncharacterized protein. (1914 aa)
	C3YBT4_BRAFL	Uncharacterized protein. (911 aa)
	C3YBT6_BRAFL	Uncharacterized protein. (385 aa)
	C3YCI5_BRAFL	Uncharacterized protein. (122 aa)
	C3YDU2_BRAFL	Uncharacterized protein. (119 aa)
	C3YFY8_BRAFL	Uncharacterized protein. (391 aa)
	C3YFY9_BRAFL	DHC_N2 domain-containing protein. (645 aa)
	C3YFZ0_BRAFL	DHC_N2 domain-containing protein. (150 aa)
	C3YFZ1_BRAFL	Uncharacterized protein. (2894 aa)
	C3YI86_BRAFL	Uncharacterized protein. (5211 aa)
	C3YJ72_BRAFL	DHC_N1 domain-containing protein. (1246 aa)
	C3YJ73_BRAFL	Uncharacterized protein. (890 aa)
	C3YJ74_BRAFL	Dynein_heavy domain-containing protein. (192 aa)
	C3YJ75_BRAFL	Uncharacterized protein. (1228 aa)
	C3YMC3_BRAFL	Uncharacterized protein. (182 aa)
	C3YNF2_BRAFL	Dynein light chain. (89 aa)
	C3YNM9_BRAFL	DOMON domain-containing protein. (190 aa)
	C3YSF3_BRAFL	Uncharacterized protein. (2348 aa)
	C3YSF5_BRAFL	Uncharacterized protein. (3019 aa)
	C3YTX2_BRAFL	Uncharacterized protein. (122 aa)
	C3YWV4_BRAFL	Uncharacterized protein. (112 aa)
	C3YWV5_BRAFL	Uncharacterized protein. (4351 aa)
	C3YXG0_BRAFL	Uncharacterized protein. (126 aa)
	C3YYU6_BRAFL	Dynein_C domain-containing protein. (162 aa)
	C3YYU7_BRAFL	Uncharacterized protein. (836 aa)
	C3YYU8_BRAFL	EF-hand domain-containing protein. (1409 aa)
	C3YYU9_BRAFL	Uncharacterized protein. (2014 aa)
	C3YZK4_BRAFL	PIH1_CS domain-containing protein. (192 aa)
	C3Z109_BRAFL	Uncharacterized protein. (4712 aa)
	C3Z110_BRAFL	Dynein_C domain-containing protein. (105 aa)
	C3Z2N8_BRAFL	Uncharacterized protein. (737 aa)
	C3Z2N9_BRAFL	Uncharacterized protein. (3453 aa)
	C3Z2U1_BRAFL	Uncharacterized protein. (62 aa)
	C3Z7I5_BRAFL	Uncharacterized protein. (4457 aa)
	C3ZE15_BRAFL	C2H2-type domain-containing protein. (3463 aa)
	C3ZE17_BRAFL	Uncharacterized protein. (1365 aa)
	C3ZEM0_BRAFL	Uncharacterized protein. (1573 aa)
	C3ZEM1_BRAFL	Uncharacterized protein. (666 aa)
	C3ZEM2_BRAFL	AAA domain-containing protein. (1051 aa)
	C3ZEM3_BRAFL	Uncharacterized protein. (1095 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3ZKM4_BRAFL	Uncharacterized protein. (5712 aa)
	C3ZNR3_BRAFL	Uncharacterized protein. (2622 aa)
	C3ZNR4_BRAFL	AAA_6 domain-containing protein. (159 aa)
	C3ZNR5_BRAFL	Uncharacterized protein. (1937 aa)
	C3ZNR6_BRAFL	Uncharacterized protein. (124 aa)
	C3ZSF1_BRAFL	Uncharacterized protein. (797 aa)
	C3ZW03_BRAFL	Uncharacterized protein. (124 aa)
	C3ZZP6_BRAFL	Uncharacterized protein. (68 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XTI6_BRAFL	C3XVH2_BRAFL	C3XTI6	C3XVH2	Uncharacterized protein.	Uncharacterized protein.	0.741
C3XTI6_BRAFL	C3XVM4_BRAFL	C3XTI6	C3XVM4	Uncharacterized protein.	Dynein light chain.	0.877
C3XTI6_BRAFL	C3XXR4_BRAFL	C3XTI6	C3XXR4	Uncharacterized protein.	Uncharacterized protein.	0.686
C3XTI6_BRAFL	C3XXR7_BRAFL	C3XTI6	C3XXR7	Uncharacterized protein.	Uncharacterized protein.	0.686
C3XTI6_BRAFL	C3XXX5_BRAFL	C3XTI6	C3XXX5	Uncharacterized protein.	Uncharacterized protein.	0.741
C3XTI6_BRAFL	C3Y751_BRAFL	C3XTI6	C3Y751	Uncharacterized protein.	Uncharacterized protein.	0.743
C3XTI6_BRAFL	C3YA42_BRAFL	C3XTI6	C3YA42	Uncharacterized protein.	Uncharacterized protein.	0.741
C3XTI6_BRAFL	C3YA43_BRAFL	C3XTI6	C3YA43	Uncharacterized protein.	Uncharacterized protein.	0.741
C3XTI6_BRAFL	C3YBT4_BRAFL	C3XTI6	C3YBT4	Uncharacterized protein.	Uncharacterized protein.	0.460
C3XTI6_BRAFL	C3YBT6_BRAFL	C3XTI6	C3YBT6	Uncharacterized protein.	Uncharacterized protein.	0.460
C3XTI6_BRAFL	C3YCI5_BRAFL	C3XTI6	C3YCI5	Uncharacterized protein.	Uncharacterized protein.	0.809
C3XTI6_BRAFL	C3YDU2_BRAFL	C3XTI6	C3YDU2	Uncharacterized protein.	Uncharacterized protein.	0.741
C3XTI6_BRAFL	C3YMC3_BRAFL	C3XTI6	C3YMC3	Uncharacterized protein.	Uncharacterized protein.	0.743
C3XTI6_BRAFL	C3YNF2_BRAFL	C3XTI6	C3YNF2	Uncharacterized protein.	Dynein light chain.	0.877
C3XTI6_BRAFL	C3YTX2_BRAFL	C3XTI6	C3YTX2	Uncharacterized protein.	Uncharacterized protein.	0.783
C3XTI6_BRAFL	C3YXG0_BRAFL	C3XTI6	C3YXG0	Uncharacterized protein.	Uncharacterized protein.	0.783
C3XTI6_BRAFL	C3YYU6_BRAFL	C3XTI6	C3YYU6	Uncharacterized protein.	Dynein_C domain-containing protein.	0.448
C3XTI6_BRAFL	C3Z2U1_BRAFL	C3XTI6	C3Z2U1	Uncharacterized protein.	Uncharacterized protein.	0.743
C3XTI6_BRAFL	C3ZW03_BRAFL	C3XTI6	C3ZW03	Uncharacterized protein.	Uncharacterized protein.	0.741
C3XTI6_BRAFL	C3ZZP6_BRAFL	C3XTI6	C3ZZP6	Uncharacterized protein.	Uncharacterized protein.	0.783