(15 nodes) Positive regulation of transcription by RNA polymerase I network (Branchiostoma floridae)

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

Your Input:
	C3YGP3_BRAFL	WD_REPEATS_REGION domain-containing protein. (657 aa)
	C3Y2Q3_BRAFL	Helicase ATP-binding domain-containing protein. (318 aa)
	C3Y4B3_BRAFL	zf-LYAR domain-containing protein. (396 aa)
	C3Y4G7_BRAFL	WD_REPEATS_REGION domain-containing protein. (779 aa)
	C3Y5A9_BRAFL	zf-LYAR domain-containing protein. (352 aa)
	C3Y7Y4_BRAFL	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (784 aa)
	C3YIH6_BRAFL	BP28CT domain-containing protein. (2129 aa)
	C3YIZ8_BRAFL	Protein kinase domain-containing protein. (1015 aa)
	C3YWU3_BRAFL	Uncharacterized protein. (132 aa)
	C3Z032_BRAFL	WD_REPEATS_REGION domain-containing protein. (505 aa)
	C3Z4B7_BRAFL	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (579 aa)
	C3ZBE0_BRAFL	WD_REPEATS_REGION domain-containing protein. (477 aa)
	C3ZLL3_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1049 aa)
	C3ZLL7_BRAFL	DUF3385 domain-containing protein. (1400 aa)
	C3ZNI8_BRAFL	Uncharacterized protein. (297 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y2Q3_BRAFL	C3Y4G7_BRAFL	C3Y2Q3	C3Y4G7	Helicase ATP-binding domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.705
C3Y2Q3_BRAFL	C3YGP3_BRAFL	C3Y2Q3	C3YGP3	Helicase ATP-binding domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.783
C3Y2Q3_BRAFL	C3YIH6_BRAFL	C3Y2Q3	C3YIH6	Helicase ATP-binding domain-containing protein.	BP28CT domain-containing protein.	0.640
C3Y2Q3_BRAFL	C3Z032_BRAFL	C3Y2Q3	C3Z032	Helicase ATP-binding domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.659
C3Y4B3_BRAFL	C3YGP3_BRAFL	C3Y4B3	C3YGP3	zf-LYAR domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.584
C3Y4B3_BRAFL	C3ZBE0_BRAFL	C3Y4B3	C3ZBE0	zf-LYAR domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.423
C3Y4G7_BRAFL	C3Y2Q3_BRAFL	C3Y4G7	C3Y2Q3	WD_REPEATS_REGION domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.705
C3Y4G7_BRAFL	C3YGP3_BRAFL	C3Y4G7	C3YGP3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C3Y4G7_BRAFL	C3YIH6_BRAFL	C3Y4G7	C3YIH6	WD_REPEATS_REGION domain-containing protein.	BP28CT domain-containing protein.	0.999
C3Y4G7_BRAFL	C3YWU3_BRAFL	C3Y4G7	C3YWU3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.966
C3Y4G7_BRAFL	C3Z032_BRAFL	C3Y4G7	C3Z032	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C3Y4G7_BRAFL	C3ZBE0_BRAFL	C3Y4G7	C3ZBE0	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.874
C3Y5A9_BRAFL	C3YGP3_BRAFL	C3Y5A9	C3YGP3	zf-LYAR domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.584
C3Y5A9_BRAFL	C3ZBE0_BRAFL	C3Y5A9	C3ZBE0	zf-LYAR domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.423
C3Y7Y4_BRAFL	C3Z4B7_BRAFL	C3Y7Y4	C3Z4B7	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.970
C3YGP3_BRAFL	C3Y2Q3_BRAFL	C3YGP3	C3Y2Q3	WD_REPEATS_REGION domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.783
C3YGP3_BRAFL	C3Y4B3_BRAFL	C3YGP3	C3Y4B3	WD_REPEATS_REGION domain-containing protein.	zf-LYAR domain-containing protein.	0.584
C3YGP3_BRAFL	C3Y4G7_BRAFL	C3YGP3	C3Y4G7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C3YGP3_BRAFL	C3Y5A9_BRAFL	C3YGP3	C3Y5A9	WD_REPEATS_REGION domain-containing protein.	zf-LYAR domain-containing protein.	0.584
C3YGP3_BRAFL	C3YIH6_BRAFL	C3YGP3	C3YIH6	WD_REPEATS_REGION domain-containing protein.	BP28CT domain-containing protein.	0.999