(10 nodes) Positive regulation of transcription by RNA polymerase III network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XZX1_BRAFL	Uncharacterized protein. (655 aa)
	C3YC22_BRAFL	NARG2_C domain-containing protein. (992 aa)
	C3YGQ8_BRAFL	TFIIB-type domain-containing protein. (153 aa)
	C3YJB3_BRAFL	WD_REPEATS_REGION domain-containing protein. (595 aa)
	C3Z6D7_BRAFL	Uncharacterized protein. (1235 aa)
	C3Z749_BRAFL	Uncharacterized protein. (1464 aa)
	C3Z8J1_BRAFL	TOG domain-containing protein. (1317 aa)
	C3ZHW1_BRAFL	Uncharacterized protein. (1570 aa)
	C3ZLL3_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1049 aa)
	C3ZLL7_BRAFL	DUF3385 domain-containing protein. (1400 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XZX1_BRAFL	C3Z6D7_BRAFL	C3XZX1	C3Z6D7	Uncharacterized protein.	Uncharacterized protein.	0.815
C3XZX1_BRAFL	C3Z749_BRAFL	C3XZX1	C3Z749	Uncharacterized protein.	Uncharacterized protein.	0.692
C3XZX1_BRAFL	C3Z8J1_BRAFL	C3XZX1	C3Z8J1	Uncharacterized protein.	TOG domain-containing protein.	0.830
C3XZX1_BRAFL	C3ZHW1_BRAFL	C3XZX1	C3ZHW1	Uncharacterized protein.	Uncharacterized protein.	0.761
C3YJB3_BRAFL	C3ZLL3_BRAFL	C3YJB3	C3ZLL3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.989
C3YJB3_BRAFL	C3ZLL7_BRAFL	C3YJB3	C3ZLL7	WD_REPEATS_REGION domain-containing protein.	DUF3385 domain-containing protein.	0.989
C3Z6D7_BRAFL	C3XZX1_BRAFL	C3Z6D7	C3XZX1	Uncharacterized protein.	Uncharacterized protein.	0.815
C3Z6D7_BRAFL	C3Z749_BRAFL	C3Z6D7	C3Z749	Uncharacterized protein.	Uncharacterized protein.	0.697
C3Z6D7_BRAFL	C3Z8J1_BRAFL	C3Z6D7	C3Z8J1	Uncharacterized protein.	TOG domain-containing protein.	0.748
C3Z6D7_BRAFL	C3ZHW1_BRAFL	C3Z6D7	C3ZHW1	Uncharacterized protein.	Uncharacterized protein.	0.779
C3Z749_BRAFL	C3XZX1_BRAFL	C3Z749	C3XZX1	Uncharacterized protein.	Uncharacterized protein.	0.692
C3Z749_BRAFL	C3Z6D7_BRAFL	C3Z749	C3Z6D7	Uncharacterized protein.	Uncharacterized protein.	0.697
C3Z749_BRAFL	C3Z8J1_BRAFL	C3Z749	C3Z8J1	Uncharacterized protein.	TOG domain-containing protein.	0.612
C3Z749_BRAFL	C3ZHW1_BRAFL	C3Z749	C3ZHW1	Uncharacterized protein.	Uncharacterized protein.	0.750
C3Z8J1_BRAFL	C3XZX1_BRAFL	C3Z8J1	C3XZX1	TOG domain-containing protein.	Uncharacterized protein.	0.830
C3Z8J1_BRAFL	C3Z6D7_BRAFL	C3Z8J1	C3Z6D7	TOG domain-containing protein.	Uncharacterized protein.	0.748
C3Z8J1_BRAFL	C3Z749_BRAFL	C3Z8J1	C3Z749	TOG domain-containing protein.	Uncharacterized protein.	0.612
C3Z8J1_BRAFL	C3ZHW1_BRAFL	C3Z8J1	C3ZHW1	TOG domain-containing protein.	Uncharacterized protein.	0.749
C3ZHW1_BRAFL	C3XZX1_BRAFL	C3ZHW1	C3XZX1	Uncharacterized protein.	Uncharacterized protein.	0.761
C3ZHW1_BRAFL	C3Z6D7_BRAFL	C3ZHW1	C3Z6D7	Uncharacterized protein.	Uncharacterized protein.	0.779