STRINGSTRING
C3ZKS9_BRAFL C3ZKS9_BRAFL C3XSQ5_BRAFL C3XSQ5_BRAFL C3Y126_BRAFL C3Y126_BRAFL C3YQC0_BRAFL C3YQC0_BRAFL C3YSG1_BRAFL C3YSG1_BRAFL C3Z7M1_BRAFL C3Z7M1_BRAFL C3ZH07_BRAFL C3ZH07_BRAFL C3ZIA7_BRAFL C3ZIA7_BRAFL C3ZWF4_BRAFL C3ZWF4_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3ZKS9_BRAFLUncharacterized protein. (1516 aa)
C3XSQ5_BRAFLSHMT domain-containing protein. (406 aa)
C3Y126_BRAFLSerine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (509 aa)
C3YQC0_BRAFLUncharacterized protein. (243 aa)
C3YSG1_BRAFLRRM domain-containing protein. (629 aa)
C3Z7M1_BRAFLUncharacterized protein. (638 aa)
C3ZH07_BRAFLUncharacterized protein. (545 aa)
C3ZIA7_BRAFLHelicase C-terminal domain-containing protein. (118 aa)
C3ZWF4_BRAFLUncharacterized protein. (132 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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