(19 nodes) Beta-tubulin binding network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Z1T6_BRAFL	Uncharacterized protein. (280 aa)
	C3XRP3_BRAFL	PPR_long domain-containing protein. (1353 aa)
	C3XVZ0_BRAFL	Uncharacterized protein. (221 aa)
	C3XY77_BRAFL	Uncharacterized protein. (810 aa)
	C3Y1Q3_BRAFL	Tubulin-specific chaperone A; Belongs to the TBCA family. (113 aa)
	C3Y4C7_BRAFL	Uncharacterized protein. (1023 aa)
	C3YC89_BRAFL	Uncharacterized protein. (734 aa)
	C3YC92_BRAFL	Uncharacterized protein. (440 aa)
	C3YEG9_BRAFL	Uncharacterized protein. (425 aa)
	C3YXX8_BRAFL	BCAS3 domain-containing protein. (825 aa)
	C3Z1T5_BRAFL	Casc1_N domain-containing protein. (607 aa)
	C3ZE66_BRAFL	Uncharacterized protein. (159 aa)
	C3ZGJ8_BRAFL	Uncharacterized protein. (363 aa)
	C3ZGJ9_BRAFL	Uncharacterized protein. (3187 aa)
	C3ZH07_BRAFL	Uncharacterized protein. (545 aa)
	C3ZIK4_BRAFL	Pex14_N domain-containing protein. (358 aa)
	C3ZL17_BRAFL	Uncharacterized protein. (908 aa)
	C3ZL19_BRAFL	Uncharacterized protein. (1149 aa)
	C3ZYE3_BRAFL	Uncharacterized protein. (475 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y1Q3_BRAFL	C3YC89_BRAFL	C3Y1Q3	C3YC89	Tubulin-specific chaperone A; Belongs to the TBCA family.	Uncharacterized protein.	0.556
C3Y1Q3_BRAFL	C3YC92_BRAFL	C3Y1Q3	C3YC92	Tubulin-specific chaperone A; Belongs to the TBCA family.	Uncharacterized protein.	0.556
C3YC89_BRAFL	C3Y1Q3_BRAFL	C3YC89	C3Y1Q3	Uncharacterized protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.556
C3YC89_BRAFL	C3YC92_BRAFL	C3YC89	C3YC92	Uncharacterized protein.	Uncharacterized protein.	0.932
C3YC92_BRAFL	C3Y1Q3_BRAFL	C3YC92	C3Y1Q3	Uncharacterized protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.556
C3YC92_BRAFL	C3YC89_BRAFL	C3YC92	C3YC89	Uncharacterized protein.	Uncharacterized protein.	0.932
C3ZGJ8_BRAFL	C3ZGJ9_BRAFL	C3ZGJ8	C3ZGJ9	Uncharacterized protein.	Uncharacterized protein.	0.943
C3ZGJ9_BRAFL	C3ZGJ8_BRAFL	C3ZGJ9	C3ZGJ8	Uncharacterized protein.	Uncharacterized protein.	0.943
C3ZL17_BRAFL	C3ZL19_BRAFL	C3ZL17	C3ZL19	Uncharacterized protein.	Uncharacterized protein.	0.946
C3ZL19_BRAFL	C3ZL17_BRAFL	C3ZL19	C3ZL17	Uncharacterized protein.	Uncharacterized protein.	0.946