(108 nodes) Regulation of developmental growth network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQ32_BRAFL	Uncharacterized protein. (1813 aa)
	C3XQ33_BRAFL	NtA domain-containing protein. (197 aa)
	C3XQD9_BRAFL	Uncharacterized protein. (1044 aa)
	C3XRE5_BRAFL	Uncharacterized protein. (569 aa)
	C3XS07_BRAFL	Uncharacterized protein. (516 aa)
	C3XSC2_BRAFL	Uncharacterized protein. (105 aa)
	C3XTV9_BRAFL	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (710 aa)
	C3XTY5_BRAFL	Uncharacterized protein. (454 aa)
	C3XU20_BRAFL	Uncharacterized protein. (353 aa)
	C3XU54_BRAFL	Bardet-Biedl syndrome 2 protein homolog. (716 aa)
	C3XU80_BRAFL	Uncharacterized protein. (363 aa)
	C3XVY8_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)
	C3XW39_BRAFL	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (163 aa)
	C3XW83_BRAFL	MIT domain-containing protein. (653 aa)
	C3XWB3_BRAFL	Uncharacterized protein. (308 aa)
	C3XYZ3_BRAFL	MADS-box domain-containing protein. (534 aa)
	C3XZJ1_BRAFL	Uncharacterized protein. (409 aa)
	C3Y062_BRAFL	Uncharacterized protein. (566 aa)
	C3Y0G1_BRAFL	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily. (420 aa)
	C3Y145_BRAFL	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (187 aa)
	C3Y1Z3_BRAFL	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (367 aa)
	C3Y3I3_BRAFL	Uncharacterized protein. (1461 aa)
	C3Y3S0_BRAFL	Uncharacterized protein. (586 aa)
	C3Y3S1_BRAFL	Uncharacterized protein. (567 aa)
	C3Y3S2_BRAFL	Uncharacterized protein. (610 aa)
	C3Y808_BRAFL	Sema domain-containing protein. (1096 aa)
	C3Y938_BRAFL	Uncharacterized protein. (537 aa)
	C3Y9B4_BRAFL	RING-type domain-containing protein. (1001 aa)
	C3Y9Y1_BRAFL	Uncharacterized protein. (798 aa)
	C3YBD3_BRAFL	Uncharacterized protein. (1051 aa)
	C3YBP7_BRAFL	BRCT domain-containing protein. (531 aa)
	C3YDG1_BRAFL	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (521 aa)
	C3YDJ4_BRAFL	RING-type domain-containing protein. (299 aa)
	C3YEB9_BRAFL	Uncharacterized protein. (300 aa)
	C3YEG9_BRAFL	Uncharacterized protein. (425 aa)
	C3YGR2_BRAFL	Uncharacterized protein. (416 aa)
	C3YGT9_BRAFL	Uncharacterized protein. (887 aa)
	C3YGV0_BRAFL	SCP domain-containing protein; Belongs to the CRISP family. (187 aa)
	C3YGW8_BRAFL	Uncharacterized protein. (340 aa)
	C3YGX1_BRAFL	H2.0-like homeobox. (389 aa)
	C3YH13_BRAFL	KASH domain-containing protein. (2704 aa)
	C3YII7_BRAFL	TGF_BETA_2 domain-containing protein. (96 aa)
	C3YJ36_BRAFL	Uncharacterized protein. (1067 aa)
	C3YJ58_BRAFL	Uncharacterized protein. (1548 aa)
	C3YK85_BRAFL	Microtubule-associated protein. (314 aa)
	C3YPI7_BRAFL	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (305 aa)
	C3YPY6_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (220 aa)
	C3YPY7_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (222 aa)
	C3YRA7_BRAFL	SCP domain-containing protein. (173 aa)
	C3YSN4_BRAFL	Uncharacterized protein. (190 aa)
	C3YTV7_BRAFL	CULLIN_2 domain-containing protein; Belongs to the cullin family. (818 aa)
	C3YUE7_BRAFL	Uncharacterized protein. (75 aa)
	C3YUJ2_BRAFL	Uncharacterized protein. (55 aa)
	C3YW19_BRAFL	Myostatin. (342 aa)
	C3YW53_BRAFL	Uncharacterized protein. (236 aa)
	C3YWD9_BRAFL	Uncharacterized protein. (744 aa)
	C3YWX2_BRAFL	Uncharacterized protein. (215 aa)
	C3YX63_BRAFL	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (354 aa)
	C3YYC7_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (303 aa)
	C3YZ17_BRAFL	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (395 aa)
	Kif4A.2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (158 aa)
	C3Z123_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)
	C3Z1Q0_BRAFL	Uncharacterized protein. (50 aa)
	C3Z2D9_BRAFL	SCP domain-containing protein. (183 aa)
	C3Z2Y9_BRAFL	Uncharacterized protein. (427 aa)
	C3Z475_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (268 aa)
	C3Z502_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
	C3Z5K9_BRAFL	Uncharacterized protein. (50 aa)
	C3Z5L0_BRAFL	Uncharacterized protein. (50 aa)
	C3Z5L1_BRAFL	Uncharacterized protein. (56 aa)
	C3Z5L2_BRAFL	Uncharacterized protein. (50 aa)
	C3Z6H6_BRAFL	Uncharacterized protein. (334 aa)
	C3Z711_BRAFL	Ig-like domain-containing protein. (743 aa)
	C3Z7E6_BRAFL	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (614 aa)
	C3Z7E8_BRAFL	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (555 aa)
	C3Z8E4_BRAFL	SH2 domain-containing protein. (305 aa)
	C3Z8E7_BRAFL	SH2 domain-containing protein. (496 aa)
	C3Z8E8_BRAFL	STAT_bind domain-containing protein. (91 aa)
	C3Z8V4_BRAFL	Uncharacterized protein. (741 aa)
	C3Z934_BRAFL	Uncharacterized protein. (123 aa)
	C3Z936_BRAFL	Uncharacterized protein. (365 aa)
	C3ZA38_BRAFL	Sema domain-containing protein; Belongs to the semaphorin family. (452 aa)
	C3ZE86_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (290 aa)
	C3ZGM5_BRAFL	Uncharacterized protein. (132 aa)
	C3ZGQ9_BRAFL	Uncharacterized protein; Belongs to the semaphorin family. (840 aa)
	C3ZGX8_BRAFL	Uncharacterized protein. (1947 aa)
	C3ZHB9_BRAFL	Uncharacterized protein. (120 aa)
	C3ZHI9_BRAFL	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (142 aa)
	C3ZHR4_BRAFL	Uncharacterized protein. (50 aa)
	C3ZHR5_BRAFL	Uncharacterized protein. (57 aa)
	C3ZHX7_BRAFL	Poly [ADP-ribose] polymerase. (486 aa)
	C3ZIM7_BRAFL	SCP domain-containing protein. (186 aa)
	C3ZIM9_BRAFL	SCP domain-containing protein. (181 aa)
	C3ZNF1_BRAFL	Uncharacterized protein. (52 aa)
	C3ZPE8_BRAFL	SCP domain-containing protein; Belongs to the CRISP family. (177 aa)
	C3ZR37_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	C3ZRI3_BRAFL	SCP domain-containing protein. (233 aa)
	C3ZT13_BRAFL	Uncharacterized protein. (238 aa)
	C3ZT14_BRAFL	RING-type domain-containing protein. (3938 aa)
	C3ZT15_BRAFL	Uncharacterized protein. (172 aa)
	C3ZT19_BRAFL	Uncharacterized protein. (4660 aa)
	C3ZTW1_BRAFL	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1250 aa)
	C3ZW38_BRAFL	Uncharacterized protein. (225 aa)
	C3ZWB1_BRAFL	Uncharacterized protein. (465 aa)
	C3ZWB2_BRAFL	Uncharacterized protein. (588 aa)
	C3ZXX8_BRAFL	Protein kinase domain-containing protein. (283 aa)
	C3ZYE3_BRAFL	Uncharacterized protein. (475 aa)
	C4A0F6_BRAFL	STAT_int domain-containing protein. (181 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XS07_BRAFL	C3XVY8_BRAFL	C3XS07	C3XVY8	Uncharacterized protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.544
C3XS07_BRAFL	C3YDJ4_BRAFL	C3XS07	C3YDJ4	Uncharacterized protein.	RING-type domain-containing protein.	0.655
C3XS07_BRAFL	C3Z502_BRAFL	C3XS07	C3Z502	Uncharacterized protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.544
C3XS07_BRAFL	C3ZGM5_BRAFL	C3XS07	C3ZGM5	Uncharacterized protein.	Uncharacterized protein.	0.502
C3XSC2_BRAFL	C3Y0G1_BRAFL	C3XSC2	C3Y0G1	Uncharacterized protein.	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	0.422
C3XSC2_BRAFL	C3ZR37_BRAFL	C3XSC2	C3ZR37	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.546
C3XU20_BRAFL	C3XW83_BRAFL	C3XU20	C3XW83	Uncharacterized protein.	MIT domain-containing protein.	0.922
C3XU54_BRAFL	C3YEG9_BRAFL	C3XU54	C3YEG9	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.947
C3XU54_BRAFL	C3ZTW1_BRAFL	C3XU54	C3ZTW1	Bardet-Biedl syndrome 2 protein homolog.	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.661
C3XU54_BRAFL	C3ZYE3_BRAFL	C3XU54	C3ZYE3	Bardet-Biedl syndrome 2 protein homolog.	Uncharacterized protein.	0.947
C3XVY8_BRAFL	C3XS07_BRAFL	C3XVY8	C3XS07	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	Uncharacterized protein.	0.544
C3XW83_BRAFL	C3XU20_BRAFL	C3XW83	C3XU20	MIT domain-containing protein.	Uncharacterized protein.	0.922
C3XZJ1_BRAFL	C3YUE7_BRAFL	C3XZJ1	C3YUE7	Uncharacterized protein.	Uncharacterized protein.	0.467
C3XZJ1_BRAFL	C3ZWB1_BRAFL	C3XZJ1	C3ZWB1	Uncharacterized protein.	Uncharacterized protein.	0.878
C3XZJ1_BRAFL	C3ZWB2_BRAFL	C3XZJ1	C3ZWB2	Uncharacterized protein.	Uncharacterized protein.	0.878
C3Y0G1_BRAFL	C3XSC2_BRAFL	C3Y0G1	C3XSC2	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.422
C3Y0G1_BRAFL	C3Y1Z3_BRAFL	C3Y0G1	C3Y1Z3	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.443
C3Y0G1_BRAFL	C3Y808_BRAFL	C3Y0G1	C3Y808	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Sema domain-containing protein.	0.422
C3Y0G1_BRAFL	C3YGT9_BRAFL	C3Y0G1	C3YGT9	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.466
C3Y0G1_BRAFL	C3YK85_BRAFL	C3Y0G1	C3YK85	Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.	Microtubule-associated protein.	0.851