78 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZAH6_BRAFL	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (453 aa)
	C3ZBM4_BRAFL	Roc domain-containing protein. (871 aa)
	C3ZBX8_BRAFL	Glucose-6-phosphate isomerase; Belongs to the GPI family. (557 aa)
	C3ZCS1_BRAFL	Uncharacterized protein. (716 aa)
	C3ZD20_BRAFL	Uncharacterized protein. (1225 aa)
	C3ZG69_BRAFL	Roc domain-containing protein. (982 aa)
	C3ZGI8_BRAFL	Uncharacterized protein; Belongs to the heat shock protein 70 family. (692 aa)
	C3ZGI9_BRAFL	Uncharacterized protein. (106 aa)
	C3ZIE7_BRAFL	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (470 aa)
	C3ZMX1_BRAFL	Uncharacterized protein. (248 aa)
	C3ZMY3_BRAFL	Uncharacterized protein. (516 aa)
	C3ZNA6_BRAFL	Uncharacterized protein. (294 aa)
	C3ZQ72_BRAFL	Uncharacterized protein. (173 aa)
	C3ZQC9_BRAFL	Uncharacterized protein. (215 aa)
	C3ZRP0_BRAFL	Roc domain-containing protein. (895 aa)
	C3ZRT7_BRAFL	Uncharacterized protein. (389 aa)
	C3ZRT8_BRAFL	SAP domain-containing protein. (159 aa)
	C3ZTE3_BRAFL	Uncharacterized protein. (1290 aa)
	C3ZTW1_BRAFL	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1250 aa)
	C3ZUV1_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (458 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)
	C3ZYN0_BRAFL	Uncharacterized protein. (1246 aa)
	C3ZXZ8_BRAFL	Death domain-containing protein. (298 aa)
	C3ZYQ3_BRAFL	Sulfotransferase; Belongs to the sulfotransferase 1 family. (335 aa)
	C3ZYU6_BRAFL	OTU domain-containing protein. (909 aa)
	C3ZYU8_BRAFL	Uncharacterized protein. (1550 aa)
	C3ZYU9_BRAFL	OTU domain-containing protein. (264 aa)
	C3ZZM6_BRAFL	Uncharacterized protein. (197 aa)
	C4A0W8_BRAFL	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
	C3XQC7_BRAFL	POLXc domain-containing protein. (186 aa)
	C3XRW5_BRAFL	Protein kinase domain-containing protein. (119 aa)
	C3XRW6_BRAFL	Receptor protein-tyrosine kinase. (609 aa)
	C3XU65_BRAFL	BZIP domain-containing protein. (375 aa)
	C3XVR2_BRAFL	WD_REPEATS_REGION domain-containing protein. (353 aa)
	C3XVR3_BRAFL	WD_REPEATS_REGION domain-containing protein. (187 aa)
	C3XVS3_BRAFL	WD_REPEATS_REGION domain-containing protein. (200 aa)
	C3XVS4_BRAFL	WD_REPEATS_REGION domain-containing protein. (187 aa)
	C3XWL3_BRAFL	C2H2-type domain-containing protein. (254 aa)
	C3XYE8_BRAFL	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (450 aa)
	C3XYZ3_BRAFL	MADS-box domain-containing protein. (534 aa)
	C3XZI5_BRAFL	Uncharacterized protein. (1222 aa)
	C3XZP7_BRAFL	Nk homeobox 4. (285 aa)
	C3Y076_BRAFL	Uncharacterized protein. (467 aa)
	C3Y0G0_BRAFL	Uncharacterized protein. (258 aa)
	C3Y0H1_BRAFL	Helicase ATP-binding domain-containing protein. (763 aa)
	C3Y177_BRAFL	Uncharacterized protein. (286 aa)
	C3Y1J5_BRAFL	Uncharacterized protein. (453 aa)
	C3Y4B3_BRAFL	zf-LYAR domain-containing protein. (396 aa)
	C3Y4G3_BRAFL	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (609 aa)
	C3Y4G4_BRAFL	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (618 aa)
	C3Y5A9_BRAFL	zf-LYAR domain-containing protein. (352 aa)
	C3Y679_BRAFL	Uncharacterized protein. (925 aa)
	C3Y6U4_BRAFL	Roc domain-containing protein. (997 aa)
	C3YAW5_BRAFL	Fork-head domain-containing protein. (110 aa)
	C3YCF0_BRAFL	Ncstrn_small domain-containing protein. (716 aa)
	C3YCU6_BRAFL	Uncharacterized protein. (667 aa)
	C3YFM2_BRAFL	Uncharacterized protein. (1230 aa)
	C3YJ58_BRAFL	Uncharacterized protein. (1548 aa)
	C3YJ68_BRAFL	LisH domain-containing protein. (300 aa)
	C3YM01_BRAFL	Uncharacterized protein. (566 aa)
	C3YT64_BRAFL	Protein kinase domain-containing protein. (149 aa)
	C3YUU7_BRAFL	KCNQ_channel domain-containing protein. (66 aa)
	C3YUU8_BRAFL	Ion_trans_2 domain-containing protein. (111 aa)
	C3YUU9_BRAFL	Ion_trans domain-containing protein; Belongs to the potassium channel family. (157 aa)
	C3YV81_BRAFL	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (525 aa)
	C3YVG9_BRAFL	Uncharacterized protein. (473 aa)
	C3YW57_BRAFL	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
	C3YWH8_BRAFL	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (287 aa)
	C3YXD5_BRAFL	OTU domain-containing protein. (226 aa)
	C3YXE8_BRAFL	OTU domain-containing protein. (845 aa)
	C3Z1H5_BRAFL	SEFIR domain-containing protein. (163 aa)
	C3Z1H6_BRAFL	SEFIR domain-containing protein. (238 aa)
	C3Z3P7_BRAFL	MFS domain-containing protein. (275 aa)
	C3Z4P8_BRAFL	Uncharacterized protein. (195 aa)
	C3Z4R3_BRAFL	Uncharacterized protein. (272 aa)
	C3Z8A2_BRAFL	RB_A domain-containing protein. (305 aa)
	C3Z8H6_BRAFL	BTB domain-containing protein. (653 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRW5_BRAFL	C3XRW6_BRAFL	C3XRW5	C3XRW6	Protein kinase domain-containing protein.	Receptor protein-tyrosine kinase.	0.870
C3XRW6_BRAFL	C3XRW5_BRAFL	C3XRW6	C3XRW5	Receptor protein-tyrosine kinase.	Protein kinase domain-containing protein.	0.870
C3XVR2_BRAFL	C3XVR3_BRAFL	C3XVR2	C3XVR3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.915
C3XVR2_BRAFL	C3XVS4_BRAFL	C3XVR2	C3XVS4	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.915
C3XVR3_BRAFL	C3XVR2_BRAFL	C3XVR3	C3XVR2	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.915
C3XVR3_BRAFL	C3XVS3_BRAFL	C3XVR3	C3XVS3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.915
C3XVS3_BRAFL	C3XVR3_BRAFL	C3XVS3	C3XVR3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.915
C3XVS3_BRAFL	C3XVS4_BRAFL	C3XVS3	C3XVS4	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.916
C3XVS4_BRAFL	C3XVR2_BRAFL	C3XVS4	C3XVR2	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.915
C3XVS4_BRAFL	C3XVS3_BRAFL	C3XVS4	C3XVS3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.916
C3XYZ3_BRAFL	C3YVG9_BRAFL	C3XYZ3	C3YVG9	MADS-box domain-containing protein.	Uncharacterized protein.	0.450
C3Y076_BRAFL	C3YV81_BRAFL	C3Y076	C3YV81	Uncharacterized protein.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.	0.509
C3Y076_BRAFL	C3ZBX8_BRAFL	C3Y076	C3ZBX8	Uncharacterized protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.722
C3YFM2_BRAFL	C3YVG9_BRAFL	C3YFM2	C3YVG9	Uncharacterized protein.	Uncharacterized protein.	0.745
C3YT64_BRAFL	C3Z1H5_BRAFL	C3YT64	C3Z1H5	Protein kinase domain-containing protein.	SEFIR domain-containing protein.	0.465
C3YT64_BRAFL	C3Z1H6_BRAFL	C3YT64	C3Z1H6	Protein kinase domain-containing protein.	SEFIR domain-containing protein.	0.465
C3YUU7_BRAFL	C3YW57_BRAFL	C3YUU7	C3YW57	KCNQ_channel domain-containing protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.482
C3YUU7_BRAFL	C4A0W8_BRAFL	C3YUU7	C4A0W8	KCNQ_channel domain-containing protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.482
C3YUU8_BRAFL	C3YUU9_BRAFL	C3YUU8	C3YUU9	Ion_trans_2 domain-containing protein.	Ion_trans domain-containing protein; Belongs to the potassium channel family.	0.473
C3YUU8_BRAFL	C3YW57_BRAFL	C3YUU8	C3YW57	Ion_trans_2 domain-containing protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.482