(81 nodes) Protein stabilization network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YDJ4_BRAFL	RING-type domain-containing protein. (299 aa)
	C3ZMF8_BRAFL	Uncharacterized protein. (677 aa)
	C3ZJC0_BRAFL	Uncharacterized protein. (127 aa)
	C3ZH07_BRAFL	Uncharacterized protein. (545 aa)
	C3ZF24_BRAFL	Uncharacterized protein. (320 aa)
	C3ZEI0_BRAFL	Uncharacterized protein. (246 aa)
	C3ZDX1_BRAFL	Uncharacterized protein. (812 aa)
	C3ZD90_BRAFL	MFS domain-containing protein. (446 aa)
	C3ZCR4_BRAFL	SWIM-type domain-containing protein. (140 aa)
	C3ZCC7_BRAFL	Uncharacterized protein. (535 aa)
	C3ZA99_BRAFL	Uncharacterized protein. (557 aa)
	C3Z9M2_BRAFL	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (608 aa)
	C3Z9G3_BRAFL	Ubiquitin-like domain-containing protein. (1268 aa)
	C3Z9E4_BRAFL	DNL-type domain-containing protein. (175 aa)
	C3Z804_BRAFL	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (970 aa)
	C3Z6G8_BRAFL	Uncharacterized protein. (382 aa)
	C3Z6E4_BRAFL	Uncharacterized protein. (1203 aa)
	C3Z629_BRAFL	Prohibitin. (276 aa)
	C3Z5U7_BRAFL	Uncharacterized protein. (648 aa)
	C3Z502_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
	C3Z4Y1_BRAFL	Uncharacterized protein. (272 aa)
	C3Z4T1_BRAFL	Uncharacterized protein. (142 aa)
	C3Z4R3_BRAFL	Uncharacterized protein. (272 aa)
	C3Z484_BRAFL	Mitogen-activated protein kinase. (385 aa)
	C3Z3J5_BRAFL	Uncharacterized protein. (192 aa)
	C3Z2E7_BRAFL	Muscle-specific homeobox-like protein. (307 aa)
	C3Z123_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)
	Kif4A.2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (158 aa)
	C3YZU1_BRAFL	Uncharacterized protein. (500 aa)
	C3YXT0_BRAFL	Uncharacterized protein. (694 aa)
	C3YXN4_BRAFL	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (157 aa)
	C3YX77_BRAFL	Uncharacterized protein. (165 aa)
	C3YWT5_BRAFL	C2H2-type domain-containing protein. (540 aa)
	C3YVK1_BRAFL	Uncharacterized protein. (230 aa)
	C3YUF9_BRAFL	DUF3504 domain-containing protein. (297 aa)
	C3YSF6_BRAFL	Uncharacterized protein. (2447 aa)
	C3YQ30_BRAFL	Peptidyl-prolyl cis-trans isomerase. (151 aa)
	C3YPY7_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (222 aa)
	C3YPY6_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (220 aa)
	C3YPM8_BRAFL	Uncharacterized protein. (302 aa)
	C3YMM0_BRAFL	Uncharacterized protein. (381 aa)
	C3YL88_BRAFL	Uncharacterized protein. (980 aa)
	C3YL87_BRAFL	Uncharacterized protein. (135 aa)
	C3YK53_BRAFL	Uncharacterized protein. (333 aa)
	C3YFG4_BRAFL	Tetraspanin. (327 aa)
	C3YES1_BRAFL	Uncharacterized protein. (344 aa)
	C3YD97_BRAFL	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (425 aa)
	C3YD77_BRAFL	Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (425 aa)
	C3Y9G3_BRAFL	Uncharacterized protein. (828 aa)
	C3Y3B1_BRAFL	Uncharacterized protein. (350 aa)
	C3Y263_BRAFL	Uncharacterized protein. (397 aa)
	C3Y0W5_BRAFL	Uncharacterized protein. (204 aa)
	C3Y0W4_BRAFL	Uncharacterized protein. (355 aa)
	C3Y0H0_BRAFL	Uncharacterized protein. (1853 aa)
	C3Y041_BRAFL	Uncharacterized protein. (701 aa)
	C3XZV0_BRAFL	Uncharacterized protein. (887 aa)
	C3XZJ1_BRAFL	Uncharacterized protein. (409 aa)
	C3XYI0_BRAFL	DJ-1_PfpI domain-containing protein. (190 aa)
	C3XXX8_BRAFL	MFS domain-containing protein. (492 aa)
	C3XX70_BRAFL	Uncharacterized protein. (868 aa)
	C3XVY8_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)
	C3XVY7_BRAFL	CW-type domain-containing protein. (465 aa)
	C3XVH9_BRAFL	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (217 aa)
	C3XVA5_BRAFL	Uncharacterized protein. (1268 aa)
	C3XS32_BRAFL	HATPase_c domain-containing protein. (731 aa)
	C3XS21_BRAFL	T-complex protein 1 subunit delta. (533 aa)
	C3XRA3_BRAFL	HATPase_c domain-containing protein. (725 aa)
	C3XPY9_BRAFL	Protein kinase domain-containing protein. (347 aa)
	C3XPX7_BRAFL	Uncharacterized protein. (321 aa)
	C3ZPH4_BRAFL	T-complex protein 1 subunit gamma. (540 aa)
	C3ZPX7_BRAFL	Uncharacterized protein; Belongs to the peptidase C19 family. (1046 aa)
	C3ZQX4_BRAFL	Uncharacterized protein. (1993 aa)
	C3ZSA1_BRAFL	Uncharacterized protein. (248 aa)
	C3ZSP5_BRAFL	Myotubularin phosphatase domain-containing protein. (522 aa)
	C3ZT09_BRAFL	CYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
	C3ZTW1_BRAFL	Smoothend-like protein protein; Belongs to the G-protein coupled receptor Fz/Smo family. (1250 aa)
	C3ZV28_BRAFL	Uncharacterized protein. (383 aa)
	C3ZW44_BRAFL	Uncharacterized protein. (172 aa)
	C4A0A7_BRAFL	Uncharacterized protein. (177 aa)
	C4A0W1_BRAFL	CYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
	Msx	Muscle segment homeobox. (275 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPY9_BRAFL	C3XRA3_BRAFL	C3XPY9	C3XRA3	Protein kinase domain-containing protein.	HATPase_c domain-containing protein.	0.437
C3XPY9_BRAFL	C3XS32_BRAFL	C3XPY9	C3XS32	Protein kinase domain-containing protein.	HATPase_c domain-containing protein.	0.437
C3XPY9_BRAFL	C3XVY8_BRAFL	C3XPY9	C3XVY8	Protein kinase domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.971
C3XPY9_BRAFL	C3XYI0_BRAFL	C3XPY9	C3XYI0	Protein kinase domain-containing protein.	DJ-1_PfpI domain-containing protein.	0.742
C3XPY9_BRAFL	C3YMM0_BRAFL	C3XPY9	C3YMM0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.452
C3XPY9_BRAFL	C3Z4Y1_BRAFL	C3XPY9	C3Z4Y1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.431
C3XPY9_BRAFL	C3Z502_BRAFL	C3XPY9	C3Z502	Protein kinase domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.997
C3XPY9_BRAFL	C3Z6G8_BRAFL	C3XPY9	C3Z6G8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.692
C3XRA3_BRAFL	C3XPY9_BRAFL	C3XRA3	C3XPY9	HATPase_c domain-containing protein.	Protein kinase domain-containing protein.	0.437
C3XRA3_BRAFL	C3XS21_BRAFL	C3XRA3	C3XS21	HATPase_c domain-containing protein.	T-complex protein 1 subunit delta.	0.499
C3XRA3_BRAFL	C3XS32_BRAFL	C3XRA3	C3XS32	HATPase_c domain-containing protein.	HATPase_c domain-containing protein.	0.900
C3XRA3_BRAFL	C3XVH9_BRAFL	C3XRA3	C3XVH9	HATPase_c domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.412
C3XRA3_BRAFL	C3Y3B1_BRAFL	C3XRA3	C3Y3B1	HATPase_c domain-containing protein.	Uncharacterized protein.	0.875
C3XRA3_BRAFL	C3YMM0_BRAFL	C3XRA3	C3YMM0	HATPase_c domain-containing protein.	Uncharacterized protein.	0.547
C3XRA3_BRAFL	C3Z6G8_BRAFL	C3XRA3	C3Z6G8	HATPase_c domain-containing protein.	Uncharacterized protein.	0.970
C3XRA3_BRAFL	C3ZCC7_BRAFL	C3XRA3	C3ZCC7	HATPase_c domain-containing protein.	Uncharacterized protein.	0.619
C3XRA3_BRAFL	C3ZH07_BRAFL	C3XRA3	C3ZH07	HATPase_c domain-containing protein.	Uncharacterized protein.	0.559
C3XRA3_BRAFL	C3ZPH4_BRAFL	C3XRA3	C3ZPH4	HATPase_c domain-containing protein.	T-complex protein 1 subunit gamma.	0.592
C3XS21_BRAFL	C3XRA3_BRAFL	C3XS21	C3XRA3	T-complex protein 1 subunit delta.	HATPase_c domain-containing protein.	0.499
C3XS21_BRAFL	C3XS32_BRAFL	C3XS21	C3XS32	T-complex protein 1 subunit delta.	HATPase_c domain-containing protein.	0.499