(45 nodes) Neuromuscular process network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZGM5_BRAFL	Uncharacterized protein. (132 aa)
	C3ZID6_BRAFL	Uncharacterized protein. (208 aa)
	C3ZID7_BRAFL	Uncharacterized protein. (73 aa)
	C3ZIM5_BRAFL	BPTI/Kunitz inhibitor domain-containing protein. (53 aa)
	C3ZKV3_BRAFL	R3H domain-containing protein. (979 aa)
	C3ZLL3_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1049 aa)
	C3ZLL7_BRAFL	DUF3385 domain-containing protein. (1400 aa)
	C3ZQC9_BRAFL	Uncharacterized protein. (215 aa)
	C3ZRS7_BRAFL	Uncharacterized protein. (159 aa)
	C3ZS60_BRAFL	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (399 aa)
	C3ZT13_BRAFL	Uncharacterized protein. (238 aa)
	C3ZT14_BRAFL	RING-type domain-containing protein. (3938 aa)
	C3ZT19_BRAFL	Uncharacterized protein. (4660 aa)
	C3ZT15_BRAFL	Uncharacterized protein. (172 aa)
	C3ZY23_BRAFL	Uncharacterized protein. (164 aa)
	C3ZY24_BRAFL	Uncharacterized protein. (132 aa)
	C3XR12_BRAFL	EGF-like domain-containing protein. (666 aa)
	C3XR72_BRAFL	Lactamase_B domain-containing protein. (308 aa)
	C3XS08_BRAFL	Uncharacterized protein. (644 aa)
	C3XSR0_BRAFL	Uncharacterized protein. (174 aa)
	C3XU27_BRAFL	Uncharacterized protein. (1078 aa)
	C3XVY8_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)
	C3XW83_BRAFL	MIT domain-containing protein. (653 aa)
	C3XZ05_BRAFL	GTP_cyclohydroI domain-containing protein. (180 aa)
	C3Y5J2_BRAFL	TLC domain-containing protein. (278 aa)
	C3Y747_BRAFL	Uncharacterized protein. (940 aa)
	C3Y7J6_BRAFL	Uncharacterized protein. (1619 aa)
	C3Y7Z4_BRAFL	Uncharacterized protein. (1345 aa)
	C3Y993_BRAFL	Uncharacterized protein. (1020 aa)
	C3YJ64_BRAFL	CAP-Gly domain-containing protein. (113 aa)
	C3YJ65_BRAFL	Dynactin domain-containing protein. (1139 aa)
	C3YPQ4_BRAFL	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (927 aa)
	C3YQ45_BRAFL	Beta-hexosaminidase. (506 aa)
	C3YS20_BRAFL	POU domain protein. (166 aa)
	C3YUG5_BRAFL	TLC domain-containing protein. (278 aa)
	C3YUH9_BRAFL	TLC domain-containing protein. (278 aa)
	C3YVL1_BRAFL	GTP_cyclohydroI domain-containing protein. (180 aa)
	C3YX63_BRAFL	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (354 aa)
	C3Z216_BRAFL	Uncharacterized protein. (487 aa)
	C3Z217_BRAFL	PDZ domain-containing protein. (254 aa)
	C3Z502_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
	C3Z5P8_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (196 aa)
	C3Z6X4_BRAFL	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (415 aa)
	C3ZAD0_BRAFL	ML domain-containing protein. (222 aa)
	C3ZFV6_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein. (440 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XZ05_BRAFL	C3YVL1_BRAFL	C3XZ05	C3YVL1	GTP_cyclohydroI domain-containing protein.	GTP_cyclohydroI domain-containing protein.	0.900
C3YQ45_BRAFL	C3ZAD0_BRAFL	C3YQ45	C3ZAD0	Beta-hexosaminidase.	ML domain-containing protein.	0.764
C3YVL1_BRAFL	C3XZ05_BRAFL	C3YVL1	C3XZ05	GTP_cyclohydroI domain-containing protein.	GTP_cyclohydroI domain-containing protein.	0.900
C3Z216_BRAFL	C3Z217_BRAFL	C3Z216	C3Z217	Uncharacterized protein.	PDZ domain-containing protein.	0.540
C3Z217_BRAFL	C3Z216_BRAFL	C3Z217	C3Z216	PDZ domain-containing protein.	Uncharacterized protein.	0.540
C3Z5P8_BRAFL	C3ZQC9_BRAFL	C3Z5P8	C3ZQC9	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.718
C3ZAD0_BRAFL	C3YQ45_BRAFL	C3ZAD0	C3YQ45	ML domain-containing protein.	Beta-hexosaminidase.	0.764
C3ZID6_BRAFL	C3ZID7_BRAFL	C3ZID6	C3ZID7	Uncharacterized protein.	Uncharacterized protein.	0.546
C3ZID6_BRAFL	C3ZY23_BRAFL	C3ZID6	C3ZY23	Uncharacterized protein.	Uncharacterized protein.	0.555
C3ZID6_BRAFL	C3ZY24_BRAFL	C3ZID6	C3ZY24	Uncharacterized protein.	Uncharacterized protein.	0.553
C3ZID7_BRAFL	C3ZID6_BRAFL	C3ZID7	C3ZID6	Uncharacterized protein.	Uncharacterized protein.	0.546
C3ZID7_BRAFL	C3ZY23_BRAFL	C3ZID7	C3ZY23	Uncharacterized protein.	Uncharacterized protein.	0.553
C3ZID7_BRAFL	C3ZY24_BRAFL	C3ZID7	C3ZY24	Uncharacterized protein.	Uncharacterized protein.	0.554
C3ZLL3_BRAFL	C3ZLL7_BRAFL	C3ZLL3	C3ZLL7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DUF3385 domain-containing protein.	0.974
C3ZLL7_BRAFL	C3ZLL3_BRAFL	C3ZLL7	C3ZLL3	DUF3385 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.974
C3ZQC9_BRAFL	C3Z5P8_BRAFL	C3ZQC9	C3Z5P8	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.718
C3ZT14_BRAFL	C3ZT15_BRAFL	C3ZT14	C3ZT15	RING-type domain-containing protein.	Uncharacterized protein.	0.900
C3ZT15_BRAFL	C3ZT14_BRAFL	C3ZT15	C3ZT14	Uncharacterized protein.	RING-type domain-containing protein.	0.900
C3ZY23_BRAFL	C3ZID6_BRAFL	C3ZY23	C3ZID6	Uncharacterized protein.	Uncharacterized protein.	0.555
C3ZY23_BRAFL	C3ZID7_BRAFL	C3ZY23	C3ZID7	Uncharacterized protein.	Uncharacterized protein.	0.553