STRINGSTRING
C3YKX2_BRAFL C3YKX2_BRAFL C3YQU2_BRAFL C3YQU2_BRAFL C3YW39_BRAFL C3YW39_BRAFL C3YZQ2_BRAFL C3YZQ2_BRAFL C3YZR1_BRAFL C3YZR1_BRAFL C3ZLH8_BRAFL C3ZLH8_BRAFL C3ZNI8_BRAFL C3ZNI8_BRAFL C3ZYE0_BRAFL C3ZYE0_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3YKX2_BRAFLDeacetylase sirtuin-type domain-containing protein. (312 aa)
C3YQU2_BRAFLUncharacterized protein. (1003 aa)
C3YW39_BRAFLUncharacterized protein. (2614 aa)
C3YZQ2_BRAFLCytosine-specific methyltransferase. (1275 aa)
C3YZR1_BRAFLUncharacterized protein. (490 aa)
C3ZLH8_BRAFLProbable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. (804 aa)
C3ZNI8_BRAFLUncharacterized protein. (297 aa)
C3ZYE0_BRAFLUncharacterized protein. (1256 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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