(16 nodes) Nucleus localization network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZQC3_BRAFL	Uncharacterized protein. (1892 aa)
	C3XRB2_BRAFL	Uncharacterized protein. (8372 aa)
	LIS1_BRAFL	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (406 aa)
	C3XWD2_BRAFL	PCM1_C domain-containing protein. (1969 aa)
	C3Y204_BRAFL	Uncharacterized protein. (596 aa)
	C3Y205_BRAFL	Uncharacterized protein. (454 aa)
	C3Y4B5_BRAFL	TACC_C domain-containing protein. (1514 aa)
	C3Y953_BRAFL	SUN domain-containing protein. (1111 aa)
	C3YJ18_BRAFL	Uncharacterized protein. (349 aa)
	C3YJ64_BRAFL	CAP-Gly domain-containing protein. (113 aa)
	C3YJ65_BRAFL	Dynactin domain-containing protein. (1139 aa)
	C3ZEY6_BRAFL	CAP-Gly domain-containing protein. (233 aa)
	C3ZLL3_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1049 aa)
	C3ZLL7_BRAFL	DUF3385 domain-containing protein. (1400 aa)
	C3ZUN4_BRAFL	CCHC-type domain-containing protein. (583 aa)
	C3ZXL7_BRAFL	Uncharacterized protein; Belongs to the intermediate filament family. (593 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRB2_BRAFL	C3Y953_BRAFL	C3XRB2	C3Y953	Uncharacterized protein.	SUN domain-containing protein.	0.902
C3XRB2_BRAFL	C3ZXL7_BRAFL	C3XRB2	C3ZXL7	Uncharacterized protein.	Uncharacterized protein; Belongs to the intermediate filament family.	0.513
C3Y204_BRAFL	C3Y205_BRAFL	C3Y204	C3Y205	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y205_BRAFL	C3Y204_BRAFL	C3Y205	C3Y204	Uncharacterized protein.	Uncharacterized protein.	0.942
C3Y953_BRAFL	C3XRB2_BRAFL	C3Y953	C3XRB2	SUN domain-containing protein.	Uncharacterized protein.	0.902
C3Y953_BRAFL	C3ZQC3_BRAFL	C3Y953	C3ZQC3	SUN domain-containing protein.	Uncharacterized protein.	0.797
C3Y953_BRAFL	C3ZXL7_BRAFL	C3Y953	C3ZXL7	SUN domain-containing protein.	Uncharacterized protein; Belongs to the intermediate filament family.	0.775
C3YJ18_BRAFL	LIS1_BRAFL	C3YJ18	C3XVT5	Uncharacterized protein.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.	0.455
C3YJ64_BRAFL	LIS1_BRAFL	C3YJ64	C3XVT5	CAP-Gly domain-containing protein.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.	0.791
C3YJ65_BRAFL	LIS1_BRAFL	C3YJ65	C3XVT5	Dynactin domain-containing protein.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.	0.791
C3ZEY6_BRAFL	LIS1_BRAFL	C3ZEY6	C3XVT5	CAP-Gly domain-containing protein.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.	0.455
C3ZLL3_BRAFL	C3ZLL7_BRAFL	C3ZLL3	C3ZLL7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DUF3385 domain-containing protein.	0.974
C3ZLL7_BRAFL	C3ZLL3_BRAFL	C3ZLL7	C3ZLL3	DUF3385 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.974
C3ZQC3_BRAFL	C3Y953_BRAFL	C3ZQC3	C3Y953	Uncharacterized protein.	SUN domain-containing protein.	0.797
C3ZQC3_BRAFL	C3ZXL7_BRAFL	C3ZQC3	C3ZXL7	Uncharacterized protein.	Uncharacterized protein; Belongs to the intermediate filament family.	0.513
C3ZXL7_BRAFL	C3XRB2_BRAFL	C3ZXL7	C3XRB2	Uncharacterized protein; Belongs to the intermediate filament family.	Uncharacterized protein.	0.513
C3ZXL7_BRAFL	C3Y953_BRAFL	C3ZXL7	C3Y953	Uncharacterized protein; Belongs to the intermediate filament family.	SUN domain-containing protein.	0.775
C3ZXL7_BRAFL	C3ZQC3_BRAFL	C3ZXL7	C3ZQC3	Uncharacterized protein; Belongs to the intermediate filament family.	Uncharacterized protein.	0.513
LIS1_BRAFL	C3YJ18_BRAFL	C3XVT5	C3YJ18	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.	Uncharacterized protein.	0.455
LIS1_BRAFL	C3YJ64_BRAFL	C3XVT5	C3YJ64	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.	CAP-Gly domain-containing protein.	0.791