(22 nodes) Modulation by host of symbiont process network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	C3Z3T8_BRAFL	Uncharacterized protein; Belongs to the cyclin family. (751 aa)
	C3Y895_BRAFL	AAA domain-containing protein; Belongs to the AAA ATPase family. (407 aa)
	C3YBP7_BRAFL	BRCT domain-containing protein. (531 aa)
	C3YPY6_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (220 aa)
	C3YPY7_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (222 aa)
	C3YQP4_BRAFL	BZIP domain-containing protein; Belongs to the bZIP family. (321 aa)
	C3YVK2_BRAFL	Uncharacterized protein. (168 aa)
	C3YZS7_BRAFL	Uncharacterized protein. (313 aa)
	Kif4A.2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (158 aa)
	C3Z123_BRAFL	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)
	C3Z4S2_BRAFL	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1142 aa)
	C3Z502_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (434 aa)
	C3Z629_BRAFL	Prohibitin. (276 aa)
	C3ZMD5_BRAFL	Uncharacterized protein. (2276 aa)
	C4A079_BRAFL	R3H domain-containing protein. (58 aa)
	C3XQU2_BRAFL	SKIP_SNW domain-containing protein. (543 aa)
	C3XRZ6_BRAFL	Uncharacterized protein. (1538 aa)
	C3XU08_BRAFL	Rab-GAP TBC domain-containing protein. (404 aa)
	C3XVY8_BRAFL	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (414 aa)
	C3XWL4_BRAFL	BHLH domain-containing protein. (342 aa)
	C3Y0J7_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1974 aa)
	C3Y1F9_BRAFL	Uncharacterized protein. (1907 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQU2_BRAFL	C3Y1F9_BRAFL	C3XQU2	C3Y1F9	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.447
C3XQU2_BRAFL	C3YPY6_BRAFL	C3XQU2	C3YPY6	SKIP_SNW domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.534
C3XQU2_BRAFL	C3YPY7_BRAFL	C3XQU2	C3YPY7	SKIP_SNW domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.534
C3XQU2_BRAFL	C3Z123_BRAFL	C3XQU2	C3Z123	SKIP_SNW domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.534
C3XQU2_BRAFL	C4A079_BRAFL	C3XQU2	C4A079	SKIP_SNW domain-containing protein.	R3H domain-containing protein.	0.447
C3XQU2_BRAFL	Kif4A.2	C3XQU2	C3Z122	SKIP_SNW domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.534
C3XRZ6_BRAFL	C3YQP4_BRAFL	C3XRZ6	C3YQP4	Uncharacterized protein.	BZIP domain-containing protein; Belongs to the bZIP family.	0.438
C3Y1F9_BRAFL	C3XQU2_BRAFL	C3Y1F9	C3XQU2	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.447
C3Y895_BRAFL	C3Z629_BRAFL	C3Y895	C3Z629	AAA domain-containing protein; Belongs to the AAA ATPase family.	Prohibitin.	0.430
C3YBP7_BRAFL	C3Z3T8_BRAFL	C3YBP7	C3Z3T8	BRCT domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.845
C3YPY6_BRAFL	C3XQU2_BRAFL	C3YPY6	C3XQU2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	SKIP_SNW domain-containing protein.	0.534
C3YPY7_BRAFL	C3XQU2_BRAFL	C3YPY7	C3XQU2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	SKIP_SNW domain-containing protein.	0.534
C3YQP4_BRAFL	C3XRZ6_BRAFL	C3YQP4	C3XRZ6	BZIP domain-containing protein; Belongs to the bZIP family.	Uncharacterized protein.	0.438
C3Z123_BRAFL	C3XQU2_BRAFL	C3Z123	C3XQU2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	SKIP_SNW domain-containing protein.	0.534
C3Z3T8_BRAFL	C3YBP7_BRAFL	C3Z3T8	C3YBP7	Uncharacterized protein; Belongs to the cyclin family.	BRCT domain-containing protein.	0.845
C3Z629_BRAFL	C3Y895_BRAFL	C3Z629	C3Y895	Prohibitin.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.430
C4A079_BRAFL	C3XQU2_BRAFL	C4A079	C3XQU2	R3H domain-containing protein.	SKIP_SNW domain-containing protein.	0.447
Kif4A.2	C3XQU2_BRAFL	C3Z122	C3XQU2	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	SKIP_SNW domain-containing protein.	0.534