(16 nodes) Fatty acid homeostasis network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3XVR6_BRAFL	BZIP domain-containing protein. (242 aa)
	Thop1.1	BZIP domain-containing protein. (336 aa)
	C3XX42_BRAFL	Uncharacterized protein. (401 aa)
	C3XX43_BRAFL	Uncharacterized protein. (374 aa)
	C3Y5K6_BRAFL	DNA polymerase. (1286 aa)
	C3Y780_BRAFL	Uncharacterized protein. (648 aa)
	C3YCL4_BRAFL	Non-specific serine/threonine protein kinase. (492 aa)
	C3YIU7_BRAFL	Uncharacterized protein. (1125 aa)
	C3YIV5_BRAFL	Aminotran_1_2 domain-containing protein. (412 aa)
	C3YJ58_BRAFL	Uncharacterized protein. (1548 aa)
	C3Z6H1_BRAFL	Uncharacterized protein. (491 aa)
	C3Z6H2_BRAFL	NR LBD domain-containing protein. (121 aa)
	C3Z6H4_BRAFL	Uncharacterized protein. (320 aa)
	C3ZE19_BRAFL	Uncharacterized protein. (400 aa)
	C3ZSP0_BRAFL	BZIP domain-containing protein. (404 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XX42_BRAFL	C3XX43_BRAFL	C3XX42	C3XX43	Uncharacterized protein.	Uncharacterized protein.	0.901
C3XX42_BRAFL	C3ZE19_BRAFL	C3XX42	C3ZE19	Uncharacterized protein.	Uncharacterized protein.	0.904
C3XX43_BRAFL	C3XX42_BRAFL	C3XX43	C3XX42	Uncharacterized protein.	Uncharacterized protein.	0.901
C3XX43_BRAFL	C3ZE19_BRAFL	C3XX43	C3ZE19	Uncharacterized protein.	Uncharacterized protein.	0.904
C3YCL4_BRAFL	C3YKX2_BRAFL	C3YCL4	C3YKX2	Non-specific serine/threonine protein kinase.	Deacetylase sirtuin-type domain-containing protein.	0.548
C3YKX2_BRAFL	C3YCL4_BRAFL	C3YKX2	C3YCL4	Deacetylase sirtuin-type domain-containing protein.	Non-specific serine/threonine protein kinase.	0.548
C3ZE19_BRAFL	C3XX42_BRAFL	C3ZE19	C3XX42	Uncharacterized protein.	Uncharacterized protein.	0.904
C3ZE19_BRAFL	C3XX43_BRAFL	C3ZE19	C3XX43	Uncharacterized protein.	Uncharacterized protein.	0.904