6 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YGW7_BRAFL	F420_oxidored domain-containing protein. (395 aa)
	C3YYQ1_BRAFL	Uncharacterized protein. (250 aa)
	C3YJ03_BRAFL	Uncharacterized protein. (1027 aa)
	C3YE07_BRAFL	Uncharacterized protein. (282 aa)
	C3YJ38_BRAFL	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)
	C3YMX4_BRAFL	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family. (268 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YE07_BRAFL	C3YJ03_BRAFL	C3YE07	C3YJ03	Uncharacterized protein.	Uncharacterized protein.	0.926
C3YE07_BRAFL	C3YJ38_BRAFL	C3YE07	C3YJ38	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.613
C3YGW7_BRAFL	C3YJ03_BRAFL	C3YGW7	C3YJ03	F420_oxidored domain-containing protein.	Uncharacterized protein.	0.926
C3YGW7_BRAFL	C3YJ38_BRAFL	C3YGW7	C3YJ38	F420_oxidored domain-containing protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.512
C3YJ03_BRAFL	C3YE07_BRAFL	C3YJ03	C3YE07	Uncharacterized protein.	Uncharacterized protein.	0.926
C3YJ03_BRAFL	C3YGW7_BRAFL	C3YJ03	C3YGW7	Uncharacterized protein.	F420_oxidored domain-containing protein.	0.926
C3YJ03_BRAFL	C3YJ38_BRAFL	C3YJ03	C3YJ38	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.985
C3YJ03_BRAFL	C3YMX4_BRAFL	C3YJ03	C3YMX4	Uncharacterized protein.	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	0.926
C3YJ03_BRAFL	C3YYQ1_BRAFL	C3YJ03	C3YYQ1	Uncharacterized protein.	Uncharacterized protein.	0.926
C3YJ38_BRAFL	C3YE07_BRAFL	C3YJ38	C3YE07	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.613
C3YJ38_BRAFL	C3YGW7_BRAFL	C3YJ38	C3YGW7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	F420_oxidored domain-containing protein.	0.512
C3YJ38_BRAFL	C3YJ03_BRAFL	C3YJ38	C3YJ03	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.985
C3YJ38_BRAFL	C3YMX4_BRAFL	C3YJ38	C3YMX4	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	0.613
C3YJ38_BRAFL	C3YYQ1_BRAFL	C3YJ38	C3YYQ1	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.613
C3YMX4_BRAFL	C3YJ03_BRAFL	C3YMX4	C3YJ03	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	Uncharacterized protein.	0.926
C3YMX4_BRAFL	C3YJ38_BRAFL	C3YMX4	C3YJ38	Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.613
C3YYQ1_BRAFL	C3YJ03_BRAFL	C3YYQ1	C3YJ03	Uncharacterized protein.	Uncharacterized protein.	0.926
C3YYQ1_BRAFL	C3YJ38_BRAFL	C3YYQ1	C3YJ38	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.613