STRINGSTRING
C3Y937_BRAFL C3Y937_BRAFL C3XPP3_BRAFL C3XPP3_BRAFL C3XTJ3_BRAFL C3XTJ3_BRAFL C3XU44_BRAFL C3XU44_BRAFL C3XU45_BRAFL C3XU45_BRAFL C3XU46_BRAFL C3XU46_BRAFL C3XYZ3_BRAFL C3XYZ3_BRAFL C3Y0I0_BRAFL C3Y0I0_BRAFL C3YEN0_BRAFL C3YEN0_BRAFL C3YEN1_BRAFL C3YEN1_BRAFL C3YLI3_BRAFL C3YLI3_BRAFL C3YSK5_BRAFL C3YSK5_BRAFL C3YW57_BRAFL C3YW57_BRAFL C3Z3L5_BRAFL C3Z3L5_BRAFL C3Z749_BRAFL C3Z749_BRAFL C3ZA15_BRAFL C3ZA15_BRAFL C3ZEY7_BRAFL C3ZEY7_BRAFL C3ZF42_BRAFL C3ZF42_BRAFL C3ZIA7_BRAFL C3ZIA7_BRAFL C3ZTY0_BRAFL C3ZTY0_BRAFL C4A0E9_BRAFL C4A0E9_BRAFL C4A0W8_BRAFL C4A0W8_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3Y937_BRAFLUncharacterized protein. (427 aa)
C3XPP3_BRAFLTranscription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (136 aa)
C3XTJ3_BRAFLTFIID_20kDa domain-containing protein. (184 aa)
C3XU44_BRAFLTAF4 domain-containing protein. (195 aa)
C3XU45_BRAFLTAF4 domain-containing protein. (58 aa)
C3XU46_BRAFLTAFH domain-containing protein. (78 aa)
C3XYZ3_BRAFLMADS-box domain-containing protein. (534 aa)
C3Y0I0_BRAFLUncharacterized protein. (311 aa)
C3YEN0_BRAFLUncharacterized protein. (721 aa)
C3YEN1_BRAFLTAFH domain-containing protein. (590 aa)
C3YLI3_BRAFLPHD-type domain-containing protein. (1052 aa)
C3YSK5_BRAFLUncharacterized protein. (964 aa)
C3YW57_BRAFLMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
C3Z3L5_BRAFLAAA domain-containing protein; Belongs to the AAA ATPase family. (392 aa)
C3Z749_BRAFLUncharacterized protein. (1464 aa)
C3ZA15_BRAFLPC4 domain-containing protein. (65 aa)
C3ZEY7_BRAFLTAF domain-containing protein. (653 aa)
C3ZF42_BRAFLMediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1424 aa)
C3ZIA7_BRAFLHelicase C-terminal domain-containing protein. (118 aa)
C3ZTY0_BRAFLUncharacterized protein. (154 aa)
C4A0E9_BRAFLUncharacterized protein. (157 aa)
C4A0W8_BRAFLMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (504 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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