(35 nodes) Positive regulation of small molecule metabolic process network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3ZPQ2_BRAFL	Uncharacterized protein. (343 aa)
	C3XRN1_BRAFL	Uncharacterized protein. (1244 aa)
	C3XXF7_BRAFL	BHLH domain-containing protein. (1047 aa)
	C3XXX7_BRAFL	PID domain-containing protein. (128 aa)
	C3Y075_BRAFL	PlsC domain-containing protein. (346 aa)
	C3Y3W0_BRAFL	Uncharacterized protein. (678 aa)
	C3Y760_BRAFL	ABC transporter domain-containing protein. (755 aa)
	C3YAR9_BRAFL	ABC transporter domain-containing protein. (764 aa)
	C3YCL4_BRAFL	Non-specific serine/threonine protein kinase. (492 aa)
	C3ZZZ0_BRAFL	Uncharacterized protein. (525 aa)
	C3YIU7_BRAFL	Uncharacterized protein. (1125 aa)
	C3YIU8_BRAFL	Uncharacterized protein. (848 aa)
	C3YKX2_BRAFL	Deacetylase sirtuin-type domain-containing protein. (312 aa)
	C3YPS7_BRAFL	Uncharacterized protein. (480 aa)
	C3YSJ1_BRAFL	Uncharacterized protein. (1454 aa)
	C3YSP7_BRAFL	ABC transporter domain-containing protein. (778 aa)
	C3YYK6_BRAFL	Uncharacterized protein. (581 aa)
	C3Z332_BRAFL	Uncharacterized protein. (829 aa)
	C3Z571_BRAFL	Uncharacterized protein. (180 aa)
	C3Z6H1_BRAFL	Uncharacterized protein. (491 aa)
	C3Z6H2_BRAFL	NR LBD domain-containing protein. (121 aa)
	C3Z6H4_BRAFL	Uncharacterized protein. (320 aa)
	C3ZEB9_BRAFL	PID domain-containing protein. (70 aa)
	C3ZEI4_BRAFL	HpcH_HpaI domain-containing protein. (296 aa)
	C3ZEI5_BRAFL	HpcH_HpaI domain-containing protein. (310 aa)
	C3ZLN9_BRAFL	ABC transporter domain-containing protein. (840 aa)
	C3ZMJ6_BRAFL	CPSF_A domain-containing protein. (1152 aa)
	C3ZNS5_BRAFL	Uncharacterized protein. (424 aa)
	C3ZZJ3_BRAFL	Uncharacterized protein. (314 aa)
	C3ZZI9_BRAFL	Uncharacterized protein. (335 aa)
	C3ZZ31_BRAFL	Nuclear receptor domain-containing protein. (70 aa)
	C3ZXV0_BRAFL	LRRNT domain-containing protein. (531 aa)
	C3ZWS9_BRAFL	EGF-like domain-containing protein. (710 aa)
	C3ZWC6_BRAFL	Zn_dep_PLPC domain-containing protein. (823 aa)
	C3ZQ47_BRAFL	Nuclear receptor domain-containing protein. (70 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XXF7_BRAFL	C3YKX2_BRAFL	C3XXF7	C3YKX2	BHLH domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.557
C3XXF7_BRAFL	C3YSJ1_BRAFL	C3XXF7	C3YSJ1	BHLH domain-containing protein.	Uncharacterized protein.	0.987
C3XXF7_BRAFL	C3YYK6_BRAFL	C3XXF7	C3YYK6	BHLH domain-containing protein.	Uncharacterized protein.	0.485
C3Y3W0_BRAFL	C3YIU7_BRAFL	C3Y3W0	C3YIU7	Uncharacterized protein.	Uncharacterized protein.	0.556
C3Y3W0_BRAFL	C3YIU8_BRAFL	C3Y3W0	C3YIU8	Uncharacterized protein.	Uncharacterized protein.	0.409
C3Y3W0_BRAFL	C3YKX2_BRAFL	C3Y3W0	C3YKX2	Uncharacterized protein.	Deacetylase sirtuin-type domain-containing protein.	0.773
C3Y3W0_BRAFL	C3YYK6_BRAFL	C3Y3W0	C3YYK6	Uncharacterized protein.	Uncharacterized protein.	0.939
C3Y3W0_BRAFL	C3Z6H1_BRAFL	C3Y3W0	C3Z6H1	Uncharacterized protein.	Uncharacterized protein.	0.556
C3Y3W0_BRAFL	C3Z6H2_BRAFL	C3Y3W0	C3Z6H2	Uncharacterized protein.	NR LBD domain-containing protein.	0.556
C3Y3W0_BRAFL	C3Z6H4_BRAFL	C3Y3W0	C3Z6H4	Uncharacterized protein.	Uncharacterized protein.	0.556
C3Y3W0_BRAFL	C3ZPQ2_BRAFL	C3Y3W0	C3ZPQ2	Uncharacterized protein.	Uncharacterized protein.	0.409
C3Y3W0_BRAFL	C3ZZ31_BRAFL	C3Y3W0	C3ZZ31	Uncharacterized protein.	Nuclear receptor domain-containing protein.	0.409
C3YCL4_BRAFL	C3YKX2_BRAFL	C3YCL4	C3YKX2	Non-specific serine/threonine protein kinase.	Deacetylase sirtuin-type domain-containing protein.	0.548
C3YIU7_BRAFL	C3Y3W0_BRAFL	C3YIU7	C3Y3W0	Uncharacterized protein.	Uncharacterized protein.	0.556
C3YIU8_BRAFL	C3Y3W0_BRAFL	C3YIU8	C3Y3W0	Uncharacterized protein.	Uncharacterized protein.	0.409
C3YKX2_BRAFL	C3XXF7_BRAFL	C3YKX2	C3XXF7	Deacetylase sirtuin-type domain-containing protein.	BHLH domain-containing protein.	0.557
C3YKX2_BRAFL	C3Y3W0_BRAFL	C3YKX2	C3Y3W0	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.773
C3YKX2_BRAFL	C3YCL4_BRAFL	C3YKX2	C3YCL4	Deacetylase sirtuin-type domain-containing protein.	Non-specific serine/threonine protein kinase.	0.548
C3YKX2_BRAFL	C3YYK6_BRAFL	C3YKX2	C3YYK6	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.578
C3YSJ1_BRAFL	C3XXF7_BRAFL	C3YSJ1	C3XXF7	Uncharacterized protein.	BHLH domain-containing protein.	0.987