(63 nodes) Extracellular exosome network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y1M5_BRAFL	Uncharacterized protein. (1366 aa)
	C3Y134_BRAFL	BRO1 domain-containing protein. (874 aa)
	C3Y041_BRAFL	Uncharacterized protein. (701 aa)
	C3XZV0_BRAFL	Uncharacterized protein. (887 aa)
	C3XS75_BRAFL	Uncharacterized protein. (1372 aa)
	C3ZUH6_BRAFL	Uncharacterized protein. (1088 aa)
	C3ZUH5_BRAFL	Uncharacterized protein. (1531 aa)
	C3ZQL7_BRAFL	NAD(P)-bd_dom domain-containing protein. (365 aa)
	C3ZQG4_BRAFL	Uncharacterized protein. (183 aa)
	C3ZP40_BRAFL	Uncharacterized protein. (171 aa)
	C3ZNC5_BRAFL	Uncharacterized protein. (341 aa)
	C3ZML1_BRAFL	Uncharacterized protein. (69 aa)
	C3ZMF8_BRAFL	Uncharacterized protein. (677 aa)
	C3ZIV3_BRAFL	Uncharacterized protein; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family. (325 aa)
	C3ZI76_BRAFL	Tr-type G domain-containing protein. (723 aa)
	C3ZI01_BRAFL	Uncharacterized protein. (402 aa)
	C3ZEP3_BRAFL	Uncharacterized protein. (340 aa)
	UFC1_BRAFL	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. (169 aa)
	C3ZBP0_BRAFL	NAD(P)-bd_dom domain-containing protein. (373 aa)
	C3ZAW5_BRAFL	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (933 aa)
	C3ZAP0_BRAFL	M20_dimer domain-containing protein. (411 aa)
	C3ZA99_BRAFL	Uncharacterized protein. (557 aa)
	C3ZA47_BRAFL	AMP_N domain-containing protein. (491 aa)
	C3Z8W1_BRAFL	Uncharacterized protein. (833 aa)
	C3Z8L1_BRAFL	Uncharacterized protein. (224 aa)
	C3Z792_BRAFL	Uncharacterized protein. (4526 aa)
	C3Z6I8_BRAFL	UEV domain-containing protein. (112 aa)
	C3Z6I7_BRAFL	UEV domain-containing protein. (115 aa)
	C3ZUX2_BRAFL	Epimerase domain-containing protein. (313 aa)
	C3ZUX5_BRAFL	UEV domain-containing protein. (143 aa)
	C3ZZZ2_BRAFL	Uncharacterized protein; Belongs to the peptidase S10 family. (676 aa)
	C3ZZZ3_BRAFL	Uncharacterized protein; Belongs to the peptidase S10 family. (236 aa)
	C4A099_BRAFL	PABS domain-containing protein. (257 aa)
	C3Z5U7_BRAFL	Uncharacterized protein. (648 aa)
	C3Z4E8_BRAFL	Epimerase domain-containing protein. (313 aa)
	C3Z4E7_BRAFL	Epimerase domain-containing protein. (226 aa)
	C3Z367_BRAFL	Uncharacterized protein. (885 aa)
	C3YYD9_BRAFL	NAD(P)-bd_dom domain-containing protein. (379 aa)
	C3YXT0_BRAFL	Uncharacterized protein. (694 aa)
	C3YT10_BRAFL	Uncharacterized protein. (266 aa)
	C3YSR2_BRAFL	Carboxypeptidase; Belongs to the peptidase S10 family. (414 aa)
	C3YSQ9_BRAFL	Carboxypeptidase; Belongs to the peptidase S10 family. (631 aa)
	C3YRF5_BRAFL	Uncharacterized protein; Belongs to the peptidase M16 family. (454 aa)
	C3YRF3_BRAFL	Uncharacterized protein. (449 aa)
	C3YL88_BRAFL	Uncharacterized protein. (980 aa)
	C3YL87_BRAFL	Uncharacterized protein. (135 aa)
	C3YKG9_BRAFL	Fumarylacetoacetase. (419 aa)
	C3YKA1_BRAFL	Uncharacterized protein. (135 aa)
	C3YI45_BRAFL	Uncharacterized protein. (442 aa)
	C3YHD8_BRAFL	PABS domain-containing protein. (372 aa)
	C3YG01_BRAFL	Uncharacterized protein. (371 aa)
	C3YDF7_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (446 aa)
	C3YD83_BRAFL	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (118 aa)
	C3YD65_BRAFL	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	C3YCC1_BRAFL	Uncharacterized protein. (673 aa)
	C3YBZ0_BRAFL	Uncharacterized protein. (682 aa)
	C3YBJ5_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family. (1050 aa)
	C3Y9Y1_BRAFL	Uncharacterized protein. (798 aa)
	C3Y321_BRAFL	Uncharacterized protein. (1515 aa)
	C3Y2Y1_BRAFL	Uncharacterized protein. (483 aa)
	C3Y2T3_BRAFL	Uncharacterized protein. (347 aa)
	C3Y2T2_BRAFL	Uncharacterized protein. (340 aa)
	C3Y2T1_BRAFL	Uncharacterized protein. (359 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y134_BRAFL	C3Y2Y1_BRAFL	C3Y134	C3Y2Y1	BRO1 domain-containing protein.	Uncharacterized protein.	0.590
C3Y134_BRAFL	C3YG01_BRAFL	C3Y134	C3YG01	BRO1 domain-containing protein.	Uncharacterized protein.	0.590
C3Y134_BRAFL	C3Z6I7_BRAFL	C3Y134	C3Z6I7	BRO1 domain-containing protein.	UEV domain-containing protein.	0.590
C3Y134_BRAFL	C3Z6I8_BRAFL	C3Y134	C3Z6I8	BRO1 domain-containing protein.	UEV domain-containing protein.	0.590
C3Y134_BRAFL	C3ZUX5_BRAFL	C3Y134	C3ZUX5	BRO1 domain-containing protein.	UEV domain-containing protein.	0.572
C3Y2Y1_BRAFL	C3Y134_BRAFL	C3Y2Y1	C3Y134	Uncharacterized protein.	BRO1 domain-containing protein.	0.590
C3Y2Y1_BRAFL	C3YG01_BRAFL	C3Y2Y1	C3YG01	Uncharacterized protein.	Uncharacterized protein.	0.540
C3Y2Y1_BRAFL	C3Z6I7_BRAFL	C3Y2Y1	C3Z6I7	Uncharacterized protein.	UEV domain-containing protein.	0.900
C3Y2Y1_BRAFL	C3Z6I8_BRAFL	C3Y2Y1	C3Z6I8	Uncharacterized protein.	UEV domain-containing protein.	0.540
C3Y2Y1_BRAFL	C3ZUX5_BRAFL	C3Y2Y1	C3ZUX5	Uncharacterized protein.	UEV domain-containing protein.	0.900
C3YG01_BRAFL	C3Y134_BRAFL	C3YG01	C3Y134	Uncharacterized protein.	BRO1 domain-containing protein.	0.590
C3YG01_BRAFL	C3Y2Y1_BRAFL	C3YG01	C3Y2Y1	Uncharacterized protein.	Uncharacterized protein.	0.540
C3YG01_BRAFL	C3Z6I7_BRAFL	C3YG01	C3Z6I7	Uncharacterized protein.	UEV domain-containing protein.	0.557
C3YG01_BRAFL	C3Z6I8_BRAFL	C3YG01	C3Z6I8	Uncharacterized protein.	UEV domain-containing protein.	0.551
C3YG01_BRAFL	C3ZUX5_BRAFL	C3YG01	C3ZUX5	Uncharacterized protein.	UEV domain-containing protein.	0.558
C3YI45_BRAFL	C3YKG9_BRAFL	C3YI45	C3YKG9	Uncharacterized protein.	Fumarylacetoacetase.	0.938
C3YKG9_BRAFL	C3YI45_BRAFL	C3YKG9	C3YI45	Fumarylacetoacetase.	Uncharacterized protein.	0.938
C3YRF3_BRAFL	C3YRF5_BRAFL	C3YRF3	C3YRF5	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.940
C3YRF5_BRAFL	C3YRF3_BRAFL	C3YRF5	C3YRF3	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein.	0.940
C3YYD9_BRAFL	C3Z4E7_BRAFL	C3YYD9	C3Z4E7	NAD(P)-bd_dom domain-containing protein.	Epimerase domain-containing protein.	0.697