(7 nodes) Regulation of establishment of protein localization to chromosome network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XS21_BRAFL	T-complex protein 1 subunit delta. (533 aa)
	C3XU62_BRAFL	Uncharacterized protein. (1010 aa)
	C3Y7R6_BRAFL	PUA domain-containing protein. (470 aa)
	C3ZCC7_BRAFL	Uncharacterized protein. (535 aa)
	C3ZF60_BRAFL	WD_REPEATS_REGION domain-containing protein. (434 aa)
	C3ZH07_BRAFL	Uncharacterized protein. (545 aa)
	C3ZPH4_BRAFL	T-complex protein 1 subunit gamma. (540 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XS21_BRAFL	C3ZCC7_BRAFL	C3XS21	C3ZCC7	T-complex protein 1 subunit delta.	Uncharacterized protein.	0.999
C3XS21_BRAFL	C3ZH07_BRAFL	C3XS21	C3ZH07	T-complex protein 1 subunit delta.	Uncharacterized protein.	0.999
C3XS21_BRAFL	C3ZPH4_BRAFL	C3XS21	C3ZPH4	T-complex protein 1 subunit delta.	T-complex protein 1 subunit gamma.	0.999
C3Y7R6_BRAFL	C3ZF60_BRAFL	C3Y7R6	C3ZF60	PUA domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.988
C3ZCC7_BRAFL	C3XS21_BRAFL	C3ZCC7	C3XS21	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.999
C3ZCC7_BRAFL	C3ZH07_BRAFL	C3ZCC7	C3ZH07	Uncharacterized protein.	Uncharacterized protein.	0.999
C3ZCC7_BRAFL	C3ZPH4_BRAFL	C3ZCC7	C3ZPH4	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.999
C3ZF60_BRAFL	C3Y7R6_BRAFL	C3ZF60	C3Y7R6	WD_REPEATS_REGION domain-containing protein.	PUA domain-containing protein.	0.988
C3ZH07_BRAFL	C3XS21_BRAFL	C3ZH07	C3XS21	Uncharacterized protein.	T-complex protein 1 subunit delta.	0.999
C3ZH07_BRAFL	C3ZCC7_BRAFL	C3ZH07	C3ZCC7	Uncharacterized protein.	Uncharacterized protein.	0.999
C3ZH07_BRAFL	C3ZPH4_BRAFL	C3ZH07	C3ZPH4	Uncharacterized protein.	T-complex protein 1 subunit gamma.	0.999
C3ZPH4_BRAFL	C3XS21_BRAFL	C3ZPH4	C3XS21	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit delta.	0.999
C3ZPH4_BRAFL	C3ZCC7_BRAFL	C3ZPH4	C3ZCC7	T-complex protein 1 subunit gamma.	Uncharacterized protein.	0.999
C3ZPH4_BRAFL	C3ZH07_BRAFL	C3ZPH4	C3ZH07	T-complex protein 1 subunit gamma.	Uncharacterized protein.	0.999