STRINGSTRING
C3YD69_BRAFL C3YD69_BRAFL C4A0W1_BRAFL C4A0W1_BRAFL C3ZT09_BRAFL C3ZT09_BRAFL C3ZCP3_BRAFL C3ZCP3_BRAFL C3Z5Q6_BRAFL C3Z5Q6_BRAFL C3Z3T8_BRAFL C3Z3T8_BRAFL C3YW63_BRAFL C3YW63_BRAFL C3YTK8_BRAFL C3YTK8_BRAFL C3Y693_BRAFL C3Y693_BRAFL C3XSK0_BRAFL C3XSK0_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3YD69_BRAFLUncharacterized protein. (573 aa)
C4A0W1_BRAFLCYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
C3ZT09_BRAFLCYCLIN domain-containing protein; Belongs to the cyclin family. (326 aa)
C3ZCP3_BRAFLProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (380 aa)
C3Z5Q6_BRAFLUncharacterized protein. (71 aa)
C3Z3T8_BRAFLUncharacterized protein; Belongs to the cyclin family. (751 aa)
C3YW63_BRAFLProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (334 aa)
C3YTK8_BRAFLGeneral transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (457 aa)
C3Y693_BRAFLUncharacterized protein. (551 aa)
C3XSK0_BRAFLCYCLIN domain-containing protein; Belongs to the cyclin family. (257 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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