(17 nodes) Endoplasmic reticulum exit site network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XUW5_BRAFL	PB1 domain-containing protein. (416 aa)
	C3XZI4_BRAFL	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (782 aa)
	C3Y134_BRAFL	BRO1 domain-containing protein. (874 aa)
	C3YL72_BRAFL	WD_REPEATS_REGION domain-containing protein. (1113 aa)
	C3YP45_BRAFL	Uncharacterized protein. (1159 aa)
	C3YP46_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (183 aa)
	C3YP47_BRAFL	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (552 aa)
	C3YP48_BRAFL	Uncharacterized protein. (483 aa)
	C3YP49_BRAFL	Uncharacterized protein. (552 aa)
	C3YP64_BRAFL	Uncharacterized protein. (108 aa)
	C3YU03_BRAFL	Protein transport protein sec16. (2645 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZBV8_BRAFL	Metallophos domain-containing protein. (376 aa)
	C3ZCW7_BRAFL	WD_REPEATS_REGION domain-containing protein. (393 aa)
	C3ZJ94_BRAFL	Uncharacterized protein. (200 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XUW5_BRAFL	C3XZI4_BRAFL	C3XUW5	C3XZI4	PB1 domain-containing protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.719
C3XUW5_BRAFL	C3YL72_BRAFL	C3XUW5	C3YL72	PB1 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.837
C3XUW5_BRAFL	C3YP45_BRAFL	C3XUW5	C3YP45	PB1 domain-containing protein.	Uncharacterized protein.	0.732
C3XUW5_BRAFL	C3YP46_BRAFL	C3XUW5	C3YP46	PB1 domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.536
C3XUW5_BRAFL	C3YP47_BRAFL	C3XUW5	C3YP47	PB1 domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.536
C3XUW5_BRAFL	C3YP48_BRAFL	C3XUW5	C3YP48	PB1 domain-containing protein.	Uncharacterized protein.	0.683
C3XUW5_BRAFL	C3YP49_BRAFL	C3XUW5	C3YP49	PB1 domain-containing protein.	Uncharacterized protein.	0.610
C3XUW5_BRAFL	C3YP64_BRAFL	C3XUW5	C3YP64	PB1 domain-containing protein.	Uncharacterized protein.	0.536
C3XUW5_BRAFL	C3YU03_BRAFL	C3XUW5	C3YU03	PB1 domain-containing protein.	Protein transport protein sec16.	0.846
C3XZI4_BRAFL	C3XUW5_BRAFL	C3XZI4	C3XUW5	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	PB1 domain-containing protein.	0.719
C3XZI4_BRAFL	C3YL72_BRAFL	C3XZI4	C3YL72	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein.	0.995
C3XZI4_BRAFL	C3YP45_BRAFL	C3XZI4	C3YP45	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.999
C3XZI4_BRAFL	C3YP46_BRAFL	C3XZI4	C3YP46	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.977
C3XZI4_BRAFL	C3YP47_BRAFL	C3XZI4	C3YP47	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	0.977
C3XZI4_BRAFL	C3YP48_BRAFL	C3XZI4	C3YP48	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.991
C3XZI4_BRAFL	C3YP49_BRAFL	C3XZI4	C3YP49	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.990
C3XZI4_BRAFL	C3YP64_BRAFL	C3XZI4	C3YP64	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.977
C3XZI4_BRAFL	C3YU03_BRAFL	C3XZI4	C3YU03	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein sec16.	0.988
C3XZI4_BRAFL	C3ZCW7_BRAFL	C3XZI4	C3ZCW7	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD_REPEATS_REGION domain-containing protein.	0.902
C3YL72_BRAFL	C3XUW5_BRAFL	C3YL72	C3XUW5	WD_REPEATS_REGION domain-containing protein.	PB1 domain-containing protein.	0.837