(41 nodes) Protein localization to endoplasmic reticulum network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XUN6_BRAFL	J domain-containing protein. (742 aa)
	C3XWL7_BRAFL	Uncharacterized protein. (278 aa)
	C3XXI4_BRAFL	Signal peptidase complex subunit 3. (215 aa)
	C3XYF6_BRAFL	Uncharacterized protein. (437 aa)
	C3XYI8_BRAFL	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (191 aa)
	C3XZE9_BRAFL	SRP54 domain-containing protein. (629 aa)
	C3Y0K5_BRAFL	RAB3GAP2_N domain-containing protein. (262 aa)
	C3Y0K6_BRAFL	Uncharacterized protein. (149 aa)
	C3Y0K7_BRAFL	Uncharacterized protein. (787 aa)
	C3Y5P1_BRAFL	Uncharacterized protein. (573 aa)
	C3Y6T6_BRAFL	Uncharacterized protein. (500 aa)
	C3Y8U7_BRAFL	Uncharacterized protein. (430 aa)
	C3Y8U9_BRAFL	Uncharacterized protein. (418 aa)
	C3YAE4_BRAFL	Uncharacterized protein. (242 aa)
	C3YCC5_BRAFL	Arsenical pump-driving ATPase; Belongs to the arsA ATPase family. (333 aa)
	C3YE91_BRAFL	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (615 aa)
	C3YJD5_BRAFL	ER lumen protein-retaining receptor. (212 aa)
	C3YLN9_BRAFL	Plug_translocon domain-containing protein. (415 aa)
	C3YLZ0_BRAFL	Uncharacterized protein. (215 aa)
	C3YMS9_BRAFL	TLC domain-containing protein. (391 aa)
	C3YRK7_BRAFL	Uncharacterized protein. (183 aa)
	C3YRN3_BRAFL	Uncharacterized protein. (107 aa)
	C3YSZ2_BRAFL	Uncharacterized protein. (263 aa)
	C3YSZ6_BRAFL	Uncharacterized protein. (535 aa)
	C3YTH8_BRAFL	ANK_REP_REGION domain-containing protein. (429 aa)
	C3YU03_BRAFL	Protein transport protein sec16. (2645 aa)
	C3YV77_BRAFL	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (570 aa)
	C3Z095_BRAFL	Uncharacterized protein. (959 aa)
	C3Z4H1_BRAFL	Uncharacterized protein. (141 aa)
	C3Z641_BRAFL	Uncharacterized protein. (66 aa)
	C3Z642_BRAFL	Sec7_N domain-containing protein. (553 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZFP9_BRAFL	TPR_REGION domain-containing protein. (251 aa)
	C3ZGZ4_BRAFL	Uncharacterized protein. (68 aa)
	C3ZJ71_BRAFL	TPR_REGION domain-containing protein. (190 aa)
	C3ZTC4_BRAFL	Uncharacterized protein. (373 aa)
	C3ZTF9_BRAFL	Uncharacterized protein; Belongs to the heat shock protein 70 family. (665 aa)
	C3ZWW4_BRAFL	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (94 aa)
	C4A039_BRAFL	Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. (78 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XUN6_BRAFL	C3XXI4_BRAFL	C3XUN6	C3XXI4	J domain-containing protein.	Signal peptidase complex subunit 3.	0.756
C3XUN6_BRAFL	C3XYF6_BRAFL	C3XUN6	C3XYF6	J domain-containing protein.	Uncharacterized protein.	0.999
C3XUN6_BRAFL	C3XYI8_BRAFL	C3XUN6	C3XYI8	J domain-containing protein.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.728
C3XUN6_BRAFL	C3XZE9_BRAFL	C3XUN6	C3XZE9	J domain-containing protein.	SRP54 domain-containing protein.	0.788
C3XUN6_BRAFL	C3Y5P1_BRAFL	C3XUN6	C3Y5P1	J domain-containing protein.	Uncharacterized protein.	0.809
C3XUN6_BRAFL	C3YAE4_BRAFL	C3XUN6	C3YAE4	J domain-containing protein.	Uncharacterized protein.	0.470
C3XUN6_BRAFL	C3YE91_BRAFL	C3XUN6	C3YE91	J domain-containing protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.746
C3XUN6_BRAFL	C3YJD5_BRAFL	C3XUN6	C3YJD5	J domain-containing protein.	ER lumen protein-retaining receptor.	0.734
C3XUN6_BRAFL	C3YLN9_BRAFL	C3XUN6	C3YLN9	J domain-containing protein.	Plug_translocon domain-containing protein.	0.998
C3XUN6_BRAFL	C3YLZ0_BRAFL	C3XUN6	C3YLZ0	J domain-containing protein.	Uncharacterized protein.	0.758
C3XUN6_BRAFL	C3YMS9_BRAFL	C3XUN6	C3YMS9	J domain-containing protein.	TLC domain-containing protein.	0.832
C3XUN6_BRAFL	C3YRK7_BRAFL	C3XUN6	C3YRK7	J domain-containing protein.	Uncharacterized protein.	0.572
C3XUN6_BRAFL	C3YRN3_BRAFL	C3XUN6	C3YRN3	J domain-containing protein.	Uncharacterized protein.	0.743
C3XUN6_BRAFL	C3Z4H1_BRAFL	C3XUN6	C3Z4H1	J domain-containing protein.	Uncharacterized protein.	0.728
C3XUN6_BRAFL	C3ZGZ4_BRAFL	C3XUN6	C3ZGZ4	J domain-containing protein.	Uncharacterized protein.	0.997
C3XUN6_BRAFL	C3ZTC4_BRAFL	C3XUN6	C3ZTC4	J domain-containing protein.	Uncharacterized protein.	0.728
C3XUN6_BRAFL	C3ZTF9_BRAFL	C3XUN6	C3ZTF9	J domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.963
C3XUN6_BRAFL	C3ZWW4_BRAFL	C3XUN6	C3ZWW4	J domain-containing protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.997
C3XUN6_BRAFL	C4A039_BRAFL	C3XUN6	C4A039	J domain-containing protein.	Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.	0.728
C3XXI4_BRAFL	C3XUN6_BRAFL	C3XXI4	C3XUN6	Signal peptidase complex subunit 3.	J domain-containing protein.	0.756