(33 nodes) Neuron death network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YZW2_BRAFL	Uncharacterized protein. (485 aa)
	C3Z8A2_BRAFL	RB_A domain-containing protein. (305 aa)
	C3ZAH8_BRAFL	Uncharacterized protein. (2208 aa)
	C3ZAI0_BRAFL	Uncharacterized protein. (206 aa)
	C3ZAI1_BRAFL	Uncharacterized protein. (181 aa)
	C3ZE38_BRAFL	TPR_REGION domain-containing protein. (955 aa)
	C3ZR37_BRAFL	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (306 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZZM6_BRAFL	Uncharacterized protein. (197 aa)
	C3ZY28_BRAFL	CARD domain-containing protein. (105 aa)
	C3ZY21_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (246 aa)
	C3ZXZ8_BRAFL	Death domain-containing protein. (298 aa)
	C3ZW56_BRAFL	Uncharacterized protein. (415 aa)
	C3ZVN8_BRAFL	Gasdermin domain-containing protein. (458 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)
	Dll1	Homeobox protein DLL-like protein, distalless. (320 aa)
	C3Y1R0_BRAFL	Spatacsin_C domain-containing protein. (1876 aa)
	C3Y396_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (242 aa)
	C3Y3W0_BRAFL	Uncharacterized protein. (678 aa)
	C3Y5J2_BRAFL	TLC domain-containing protein. (278 aa)
	C3Y726_BRAFL	Uncharacterized protein. (215 aa)
	C3YCF0_BRAFL	Ncstrn_small domain-containing protein. (716 aa)
	C3YH71_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (553 aa)
	C3YH73_BRAFL	FAT domain-containing protein. (2357 aa)
	C3YJC3_BRAFL	J domain-containing protein. (204 aa)
	C3YUG5_BRAFL	TLC domain-containing protein. (278 aa)
	C3YUH9_BRAFL	TLC domain-containing protein. (278 aa)
	C3YVP4_BRAFL	Uncharacterized protein. (894 aa)
	C3YVZ3_BRAFL	Uncharacterized protein. (600 aa)
	C3YZ01_BRAFL	DNA ligase. (793 aa)
	C3YZ38_BRAFL	Uncharacterized protein; Belongs to the peptidase C14A family. (809 aa)
	C3Z4P8_BRAFL	Uncharacterized protein. (195 aa)
	C3XQC7_BRAFL	POLXc domain-containing protein. (186 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQC7_BRAFL	C3YZ01_BRAFL	C3XQC7	C3YZ01	POLXc domain-containing protein.	DNA ligase.	0.740
C3Y396_BRAFL	C3Y726_BRAFL	C3Y396	C3Y726	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.486
C3Y3W0_BRAFL	C3YJC3_BRAFL	C3Y3W0	C3YJC3	Uncharacterized protein.	J domain-containing protein.	0.468
C3Y726_BRAFL	C3Y396_BRAFL	C3Y726	C3Y396	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.486
C3Y726_BRAFL	C3YZ38_BRAFL	C3Y726	C3YZ38	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.486
C3Y726_BRAFL	C3YZW2_BRAFL	C3Y726	C3YZW2	Uncharacterized protein.	Uncharacterized protein.	0.541
C3Y726_BRAFL	C3ZY21_BRAFL	C3Y726	C3ZY21	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.486
C3Y726_BRAFL	C3ZY28_BRAFL	C3Y726	C3ZY28	Uncharacterized protein.	CARD domain-containing protein.	0.486
C3YH71_BRAFL	C3YH73_BRAFL	C3YH71	C3YH73	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.948
C3YH71_BRAFL	C3YZ01_BRAFL	C3YH71	C3YZ01	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DNA ligase.	0.528
C3YH73_BRAFL	C3YH71_BRAFL	C3YH73	C3YH71	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.948
C3YH73_BRAFL	C3YZ01_BRAFL	C3YH73	C3YZ01	FAT domain-containing protein.	DNA ligase.	0.528
C3YJC3_BRAFL	C3Y3W0_BRAFL	C3YJC3	C3Y3W0	J domain-containing protein.	Uncharacterized protein.	0.468
C3YZ01_BRAFL	C3XQC7_BRAFL	C3YZ01	C3XQC7	DNA ligase.	POLXc domain-containing protein.	0.740
C3YZ01_BRAFL	C3YH71_BRAFL	C3YZ01	C3YH71	DNA ligase.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.528
C3YZ01_BRAFL	C3YH73_BRAFL	C3YZ01	C3YH73	DNA ligase.	FAT domain-containing protein.	0.528
C3YZ38_BRAFL	C3Y726_BRAFL	C3YZ38	C3Y726	Uncharacterized protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.486
C3YZW2_BRAFL	C3Y726_BRAFL	C3YZW2	C3Y726	Uncharacterized protein.	Uncharacterized protein.	0.541
C3Z4P8_BRAFL	C3ZXZ8_BRAFL	C3Z4P8	C3ZXZ8	Uncharacterized protein.	Death domain-containing protein.	0.540
C3Z4P8_BRAFL	C3ZZM6_BRAFL	C3Z4P8	C3ZZM6	Uncharacterized protein.	Uncharacterized protein.	0.544