STRINGSTRING
C3XTE9_BRAFL C3XTE9_BRAFL C3XRV1_BRAFL C3XRV1_BRAFL C3XXL0_BRAFL C3XXL0_BRAFL C3YJB3_BRAFL C3YJB3_BRAFL C3ZLL3_BRAFL C3ZLL3_BRAFL C3ZLL7_BRAFL C3ZLL7_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3XTE9_BRAFLUncharacterized protein. (482 aa)
C3XRV1_BRAFLE3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1679 aa)
C3XXL0_BRAFLUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1179 aa)
C3YJB3_BRAFLWD_REPEATS_REGION domain-containing protein. (595 aa)
C3ZLL3_BRAFLUncharacterized protein; Belongs to the PI3/PI4-kinase family. (1049 aa)
C3ZLL7_BRAFLDUF3385 domain-containing protein. (1400 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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