(40 nodes) Protein transmembrane transport network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YJE7_BRAFL	J domain-containing protein. (118 aa)
	C3YLN9_BRAFL	Plug_translocon domain-containing protein. (415 aa)
	C3YLR4_BRAFL	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (170 aa)
	C3YMS9_BRAFL	TLC domain-containing protein. (391 aa)
	C3YMZ1_BRAFL	RING-type domain-containing protein. (361 aa)
	C3YPF7_BRAFL	Uncharacterized protein. (212 aa)
	C3YPL6_BRAFL	Uncharacterized protein; Belongs to the AAA ATPase family. (538 aa)
	C3YZW2_BRAFL	Uncharacterized protein. (485 aa)
	C3Z1V2_BRAFL	Uncharacterized protein. (87 aa)
	C3Z1V4_BRAFL	C2 domain-containing protein. (620 aa)
	C3YH46_BRAFL	WD_REPEATS_REGION domain-containing protein. (314 aa)
	C3YBL8_BRAFL	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (853 aa)
	C3Y8L0_BRAFL	Uncharacterized protein. (177 aa)
	C3Y2B5_BRAFL	Tim44 domain-containing protein. (257 aa)
	C3Y168_BRAFL	SH3 domain-containing protein. (465 aa)
	C3Y0N4_BRAFL	Uncharacterized protein. (337 aa)
	C3Z2V6_BRAFL	DUF4097 domain-containing protein. (242 aa)
	C3Z8J0_BRAFL	Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (576 aa)
	C3Z939_BRAFL	CHCH domain-containing protein. (147 aa)
	C3Z9E4_BRAFL	DNL-type domain-containing protein. (175 aa)
	C3ZAR4_BRAFL	Uncharacterized protein. (218 aa)
	C3ZGZ4_BRAFL	Uncharacterized protein. (68 aa)
	C3ZH03_BRAFL	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (351 aa)
	C3ZIK4_BRAFL	Pex14_N domain-containing protein. (358 aa)
	C3ZTF9_BRAFL	Uncharacterized protein; Belongs to the heat shock protein 70 family. (665 aa)
	C3ZWW4_BRAFL	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (94 aa)
	C3ZXB4_BRAFL	Uncharacterized protein. (234 aa)
	C3ZYW3_BRAFL	WD_REPEATS_REGION domain-containing protein. (314 aa)
	C3ZYY7_BRAFL	TPR_REGION domain-containing protein. (564 aa)
	C4A096_BRAFL	Uncharacterized protein. (200 aa)
	C3Y0H0_BRAFL	Uncharacterized protein. (1853 aa)
	C3XZT9_BRAFL	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (223 aa)
	C3XYN6_BRAFL	TPR_REGION domain-containing protein. (635 aa)
	C3XYF6_BRAFL	Uncharacterized protein. (437 aa)
	C3XX83_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (304 aa)
	C3XVC6_BRAFL	Uncharacterized protein. (124 aa)
	C3XUN6_BRAFL	J domain-containing protein. (742 aa)
	C3XTZ6_BRAFL	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (393 aa)
	C3XS07_BRAFL	Uncharacterized protein. (516 aa)
	C3XPM9_BRAFL	Pex2_Pex12 domain-containing protein. (177 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPM9_BRAFL	C3XYN6_BRAFL	C3XPM9	C3XYN6	Pex2_Pex12 domain-containing protein.	TPR_REGION domain-containing protein.	0.874
C3XPM9_BRAFL	C3Y0H0_BRAFL	C3XPM9	C3Y0H0	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.892
C3XPM9_BRAFL	C3Y168_BRAFL	C3XPM9	C3Y168	Pex2_Pex12 domain-containing protein.	SH3 domain-containing protein.	0.951
C3XPM9_BRAFL	C3YBL8_BRAFL	C3XPM9	C3YBL8	Pex2_Pex12 domain-containing protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.639
C3XPM9_BRAFL	C3YH46_BRAFL	C3XPM9	C3YH46	Pex2_Pex12 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.801
C3XPM9_BRAFL	C3YMZ1_BRAFL	C3XPM9	C3YMZ1	Pex2_Pex12 domain-containing protein.	RING-type domain-containing protein.	0.982
C3XPM9_BRAFL	C3YPL6_BRAFL	C3XPM9	C3YPL6	Pex2_Pex12 domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.911
C3XPM9_BRAFL	C3Z2V6_BRAFL	C3XPM9	C3Z2V6	Pex2_Pex12 domain-containing protein.	DUF4097 domain-containing protein.	0.860
C3XPM9_BRAFL	C3ZAR4_BRAFL	C3XPM9	C3ZAR4	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.453
C3XPM9_BRAFL	C3ZH03_BRAFL	C3XPM9	C3ZH03	Pex2_Pex12 domain-containing protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.995
C3XPM9_BRAFL	C3ZIK4_BRAFL	C3XPM9	C3ZIK4	Pex2_Pex12 domain-containing protein.	Pex14_N domain-containing protein.	0.940
C3XPM9_BRAFL	C3ZYW3_BRAFL	C3XPM9	C3ZYW3	Pex2_Pex12 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.801
C3XPM9_BRAFL	C3ZYY7_BRAFL	C3XPM9	C3ZYY7	Pex2_Pex12 domain-containing protein.	TPR_REGION domain-containing protein.	0.874
C3XS07_BRAFL	C3XTZ6_BRAFL	C3XS07	C3XTZ6	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.792
C3XS07_BRAFL	C3XVC6_BRAFL	C3XS07	C3XVC6	Uncharacterized protein.	Uncharacterized protein.	0.510
C3XS07_BRAFL	C3XZT9_BRAFL	C3XS07	C3XZT9	Uncharacterized protein.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.527
C3XS07_BRAFL	C3Y0N4_BRAFL	C3XS07	C3Y0N4	Uncharacterized protein.	Uncharacterized protein.	0.985
C3XS07_BRAFL	C3Y2B5_BRAFL	C3XS07	C3Y2B5	Uncharacterized protein.	Tim44 domain-containing protein.	0.768
C3XS07_BRAFL	C3Y8L0_BRAFL	C3XS07	C3Y8L0	Uncharacterized protein.	Uncharacterized protein.	0.688
C3XS07_BRAFL	C3YLR4_BRAFL	C3XS07	C3YLR4	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.716